Conserved Protein Domain Family
Qua1
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pfam16274: Qua1 (this model, PSSM-Id:292891 is obsolete and has been replaced by 465079)
Qua1 domain
This domain, approximately 40 residues in length, is mainly found in KH-domain containing, RNA-binding, signal transduction-associated protein 1 from yeast to human. It forms a homodimer composed of a perpendicular interaction of two helical hairpins, and the Qua1 domain is sufficient for homodimerization which is required for the regulation of alternative splicing.
Links
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Statistics
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PSSM-Id: 292891
Aligned: 10 rows
Threshold Bit Score: 83.6372
Created: 29-Jun-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Q6NW62         7 YLPQLLAERDSLDPSFTHAMKLISAEIEKI-EK-GDT--E-K-DTE-SYLDLFTMKN 56  zebrafish
Q60749       103 YLPELMAEKDSLDPSFTHAMQLLSVEIEKI-QK-GESk-K-D-DEE-NYLDLFSHKN 153 house mouse
XP_003760452   5 YLPELMAEKDSLDPSFTHALRLVNQEIEKF-QK-GESk-----EEE-KYIDVVINKN 53  Tasmanian devil
CAG10716       6 YLPELLAEKDSLDSSFTHAMKLISAEIERI-QK-GETk-KeP-EKE-TYLDLFATKN 57  spotted green pufferfish
NP_001017045   7 YLPELMAEKDSLDPSFTHAMSLLGKEIERL-KKgGDAk-K-D-EED-TYLDLFSHKN 58  western clawed frog
XP_001364980   6 YLPELMAEKDSLDPSFVHATRLLAEEIEKF-QG-SEGk-K-D-DEEkKYLDVISNKN 57  gray short-tailed opossum
XP_007249462   7 YLPQLLAERDSLDGSFIHAMKLISAEIERV-QK-EEAp-E-K-DNE-AYLDLFTAKN 57  Mexican tetra
XP_004077249   6 CLPELVAEKNSLDPSFVHAVRLLAEEIEKY-DG-DELr-K-DgDVK-KYLDIISNKN 57  Japanese medaka
XP_002609602  13 YLPQLLAEKDSLDPSFVHASRLIEEEISKL-EK-DDk--S-K-EPP-KYKEVHTDKp 62  Florida lancelet
XP_003383496  28 ILEELKAEKNALDPSFCHCIRLLEAEINRLaDR-NDPdkS-L-KEK-IYIPIEDQKN 80  Amphimedon queenslandica
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