1LE5,3JV5,1MY5,3DO7,1IMH


Conserved Protein Domain Family
RHD_dimer
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pfam16179: RHD_dimer (this model, PSSM-Id:292797 is obsolete and has been replaced by 465045)
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Rel homology dimerization domain
The Rel homology domain (RHD) is composed of two structural domains, an N-terminal DNA_binding domain (pfam00554) and a C-terminal dimerization domain. This is the dimerization domain.
Links
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Statistics
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PSSM-Id: 292797
Aligned: 62 rows
Threshold Bit Score: 104.194
Created: 21-Jul-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
1LE5_B        212 KIVRMDRTAGCVTGGEEIYLLCDKVQKdDIQIRFYEEEeng----gvWEGFGDFSPTDVHRQfAIVFKTPKYKDVNI--T 285  house mouse
XP_011261254  430 EICKKSLTSCPCTGGLELIILGKNFLK-DTRVVFRLDNddvtsleqqWECTVTPDKEYLHPA-HLVCVVPAYRRQDLapT 507  Florida carpe...
EHJ69063      413 EVCRKSLVSCPVTGGLELYLLGKNFLK-ETRVVFRVKQdg-----vtWEEEVVPDKEFLQQT-HLVCCVPAYSRPDI--Q 483  monarch butte...
XP_008194364  410 EICKKSLTSCPASGGLELFVLGKNFLK-DTKVHFQQIDddr---hirWEQAVVPDKEYLQQT-HFVCVIPPYRRPDI--T 482  red flour beetle
XP_010716455  179 EILKKSLHSCSVKGEEEVFLIGKNFLK-GTKVIFQENVsde----nsWKAEAEIDMELFHQN-HLIVKVPPYHDQRI--T 250  turkey
XP_012775049  348 EILRKSLHSCSVKGGEEVFIIGKNFLK-GTKVIFQENItdd----nsWQAEAKIDMDLFHQN-HLIVTVPPFHNQSI--T 419  zebra mbuna
BAF99033        8 hIEKYSINSCSVNGGHEMIVTGSNFLP-ESKIIFLEKGqdg---rpqWEVEGKIIKEKCQGA-HIVLEVPPYHNPAV--T 80   cattle
XP_002934369  585 QVENYSLSACSVNGREELLICGSNFLS-DSKVIFLEKGpdg---klqWEEEAKVNKLKSNES-LLSVQVPEYCNKEI--T 657  western clawe...
XP_003201273  533 MVEKQDMDACSVLGGQQMILTGQNFSA-DSKVIFMEKThdg---qqiWELEATVDKDKSQAS-MLFIEVPPYRDPSI--C 605  zebrafish
XP_700591     506 AVEHQDTDHSSVLGGAQMILRGQNFTP-ESKVIFFEKThgd---lqiWESEAKVYRDKSTSN-LLFLEIPPYRDTNI--Y 578  zebrafish

1LE5_B        286 KPASVFVQLRRKSDLETSEPKPFLYYPE 313  house mouse
XP_011261254  508 ETVNVKLYAVS-SGK-TSEPHTFLYTAT 533  Florida carpenter ant
EHJ69063      484 EAVCVQLFVRS-GGK-SSEPHAFYYTPA 509  monarch butterfly
XP_008194364  483 EPVTVRLCVVS-SGK-TSEPHQFVYTPV 508  red flour beetle
XP_010716455  251 SAVSVGIYVVTNAG-RSHDVQQFTYTPD 277  turkey
XP_012775049  420 SPVSVGIFVMTNAGR-SHEAQPFTYTPD 446  zebra mbuna
BAF99033       81 AAVQVHFYLCN-GKRKKSQSQRFTYTPv 107  cattle
XP_002934369  658 RPLQVYFYISNGRRK-RSPMQSFRYLPI 684  western clawed frog
XP_003201273  606 HAVKVNFYVINGKRK-RSQPQHFTYTPL 632  zebrafish
XP_700591     579 RPVKVNFHVLNGKKK-CSQSQNFTYTPL 605  zebrafish
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