Conserved Protein Domain Family
SAP130_C

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pfam16014: SAP130_C (this model, PSSM-Id:292633 is obsolete and has been replaced by 464973)
Histone deacetylase complex subunit SAP130 C-terminus
Statistics
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PSSM-Id: 292633
Aligned: 8 rows
Threshold Bit Score: 608.044
Created: 24-Jul-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_005991273  647 AQGSSPRPSILRKKPATDGLAVRKSLIPPQPSEATSPRLDSAMRNTSGSPRPAGAKPKPDIHVSVMPQVTVAVEAVPNQN 726  coelacanth
XP_007494039  634 AQGSSPRPSILRKKPATDGMAVRKSLIPPQPPEVTSPRVESSIRSTSGSPRPSGAKPKPEIHVSMATPVTVSVEAVSNQS 713  gray short-ta...
NP_001243552  629 SLVTSPRPSILRKKPANEGAAVRKNLIPAQLGDTTAPRIDGPIRSASGSPRPAGVKPKPDIHMSLAPSVAAAIEAIPSQG 708  zebrafish
XP_007245136  632 TLVSSPRPSILRKKPAGEGAGVRKNLIPAQLGDP--GRMDVGIRGTSGSPRPAGVKPKPDILVGLAPPVNPAVEALTGQN 709  Mexican tetra
XP_005451265  634 TLVSSPRPSILRKKPANET-CVRKNLIPAQ-TEASTGRIDSGVRGA-GSPRPAGVKPKAEVHMAVAPPVMATVEALPSQG 710  Nile tilapia
XP_006637717  644 TLISSPRPSILRKKPAGEGSAVRKNAFPSQAAEATSPRLDGAIRSATGSPRPAGAKSKPEIHVAVTPPVTVTVEAMSIQS 723  spotted gar
XP_012825462  595 AQGSSPRPSILRKKPATDGLSVRKSLIPPHPGDAVSPRQDSSLRSTSASPRPAGAKPKADLHVPVAPGVTGDPGA----- 669  western clawe...
XP_005165953  650 TLVSSPRPSILRKKPVTEG-AVRKCLIQAQPSEPNAGRVDSGIRL-SGSPRPAGVKPKPDIHVAMAPPVMAAVEALVGHV 727  zebrafish
XP_005991273  727 SEQPSLTV-PPTSQ---QAIPTIIPPPAP--PSQPPV--TLSTLAASVP--LATPTPvCLAsvVAPSSQPAASTAPSMVV 796  coelacanth
XP_007494039  714 SDQPTIAV-QPTSQqppPAIPTIIAAASP--PSQPSV--ALSTIPGAVP--VTPPIT-TIA--AATPASSTVGGSLSTVM 783  gray short-ta...
NP_001243552  709 TEQQAQHVgPPSSQlasQPLPSLLASVTP--PSLPAP--ALSALPAAMT--VTQPIP-SMTnvVAQPIQPAANNTSVCTI 781  zebrafish
XP_007245136  710 PDQQQNSA-LPPSQipaQPVSSLLTSATP--TSQP--------VPAAMA--VTPPIP-SMAnvVAPPSHPGATSTAACPI 775  Mexican tetra
XP_005451265  711 GEQQVVSS---NTQhltQAIPTMLATPGPvpPSQPST--VLSSLPAAMA--VTPPVPaSMAntVASPTQPAASSTPACAT 783  Nile tilapia
XP_006637717  724 SEQQ--AA-PSPAQhpsQAIPAILTAAAA--APPSQP--TAALAALPAAmaVTPPIPaSLAnvVAPPTQPAASSTAACAV 796  spotted gar
XP_012825462  670 ADQPNAAAsLPSSHhpaAAVPS------P--PSQPAS----GPIPSSIH--ITPA---TIPalSAPP--PLLSNAPS--- 727  western clawe...
XP_005165953  728 GEQQTLST-P--VQhhsQAIPTLLAPPAP--APPSQPtaVLSALPATMA--VTPPVPaSMAnaVASPTQPAASSTAALS- 799  zebrafish
XP_005991273  797 GSMVPDIKIKQESEAMDTTQSVSvssvpA-LATTAISPAMTPLANRLAPP--P-SELPPGASPRKKPRKQQHVISTEEGE 872  coelacanth
XP_007494039  784 GPAVPEIKIKEEVEPMDIMRPVSav--pP-LTTNTVSPSLALLANNLSMP--P-SDLPPGASPRKKPRKQQHVISTEEGD 857  gray short-ta...
NP_001243552  782 NSNLPELNIKQEPEPMDSSKPV--------------ALGPNSGAQMLTVP--P-TDLTLGASPRKKPRKQQHIISTEESE 844  zebrafish
XP_007245136  776 SSTLPEIHVKQEAEQMDTSKPV--------------GPAPPSGTPALAVP--S-ADLTPGASPRKKPRKQQHVISTEESE 838  Mexican tetra
XP_005451265  784 SSVCPDVKIKQEVEAMDTSQ--Pd----P-NTSMSAAPALTTQTSTLSTP--AtGDLIPGASPRKKPRKQQHVISTEESE 854  Nile tilapia
XP_006637717  797 SSALPEIKIKQEVEPMDTSQQVP-----S-VTPTVVAPVLTPLGNSLGLS--A-GDLLPGASPRKKPRKQQHVISTEESE 867  spotted gar
XP_012825462  728 GAVIPEAKVKEEAEPMDISRPVSv----PpLPPNSISSPLTVLANNISIP--A-GELLPGASPRKKPRKQQHVISTEEGD 800  western clawe...
XP_005165953  800 -STLPEVKIKQEAEPMDTSQAVPl----A-PSLTGPAPSLSSQSSTLTVSsqP-GELLPGASPRKKPRKQQHVISTEETE 872  zebrafish
XP_005991273  873 MMETNSTDDEKF-APKPIVLKAEKQKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRHSDVRVKEEKKM 951  coelacanth
XP_007494039  858 MMETNSTDDEKS-TPKSLLVKAEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEKKA 936  gray short-ta...
NP_001243552  845 MMETNSTDEEKF-PPKPLSQRAEKRKSPPKEYIDEEGVRYVPARVRPPITLLRHYRNPWKAAYHHFQRYSDVRIKEDKKG 923  zebrafish
XP_007245136  839 MMEANSTDEERV-LTKPPSQRPEKRKSPPKEYIDEEGVRYVPVRIRPPVTLLRHYRNPWKAAYHHFQRYSDVRVKEEKKG 917  Mexican tetra
XP_005451265  855 MVETNSTDEEKT-PGRPITGRAERRESPPREYVDEEGVRYVPVKPRPPITLLRHYRNPWKAAYHHFQRYSDIRVKEEKKG 933  Nile tilapia
XP_006637717  868 MMETNSTDEEKS-TARPLAMKAEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDIRVKEEKKC 946  spotted gar
XP_012825462  801 MMETNSTDEERChAVKPLTSRPEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEKKL 880  western clawe...
XP_005165953  873 MVETNSTDEERA-SSRAPGNRMERHESPPREYVDEDGVRYVPVRPRPPHTHLRQYRNPWKAAYHHFQRYSDIRVKEEKKG 951  zebrafish
XP_005991273  952 TLQEMANQKGITCRAQGWKVHLCAAQLMQLTNLEHDVYDRLATLQEGLIPKKKAATDDDLHRINELIQGNMQRCKLVMDQ 1031 coelacanth
XP_007494039  937 MLQEIANQKGVSCRAQGWKVHLCAAQLLQLTNLEHDVYERLTTLQEGIIPKKKAATDDDLHRINELIQGNMQRCKLVMDQ 1016 gray short-ta...
NP_001243552  924 SMQDVANQKGVVCRAQGWKIHLCAAQLMQLSNLEHDVYSRLTTLQEGFVPKKKAGADVDLHRINELIQGNMQRCKLVMDQ 1003 zebrafish
XP_007245136  918 SLQDVANQKGVVCRAQGWKIHLCSAQLQQLTNLEHDAYSRLTTLQEGLVPKKKSGGDDDLHRISELIQGNMQRCKLVMDQ 997  Mexican tetra
XP_005451265  934 SLQDMANQRGVACRAQGWKIHLCAAQLRQLSSLEHDVYSRLSTLQEGLIPKKRAGADDDLHRINELIQGNMQRCKLVMDQ 1013 Nile tilapia
XP_006637717  947 TLQDMANQKGVVCRAQGWKIHLCAAQLLQLTSLERDVYSRLTTLQEGLIPKKKAGADDDLHRINELIQGNMQRCKLVIDQ 1026 spotted gar
XP_012825462  881 TLQEVANQKGITCRVQGWKTHLCAAQLLQLIKLEQDVFERLTVLQEGLIPKKKTATDDDLHRINELIQGNMQRCKLVMDQ 960  western clawe...
XP_005165953  952 SLQDMANQRGVACRAQGWKVHLCAAQLLQLSNLEHDVYSRLTTLQEGLIPKKRAGADDDLHRINELIQGNMQRCKLVMDQ 1031 zebrafish
XP_005991273 1032 ISEARESMMKVLDHKDRVLKLLN 1054 coelacanth
XP_007494039 1017 ISEARDSMLKVLDHKERVLKLLN 1039 gray short-tailed opossum
NP_001243552 1004 ITEARDSMLKVLDHKERVLKLLN 1026 zebrafish
XP_007245136  998 ITEARESMMKVLDHRERVLKLLN 1020 Mexican tetra
XP_005451265 1014 VTEARDTMMKVLDHKEKVLKLLN 1036 Nile tilapia
XP_006637717 1027 ITEARDAMMKVLDHKDRVMKLLN 1049 spotted gar
XP_012825462  961 ITESRDCMLKVLDHKDRVLKLLN 983  western clawed frog
XP_005165953 1032 VTEARDTMMKVLDHKDRVLKLLN 1054 zebrafish
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