Conserved Protein Domain Family
AP-5_subunit_s1

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pfam15001: AP-5_subunit_s1 (this model, PSSM-Id:291662 is obsolete and has been replaced by 434380)
AP-5 complex subunit sigma-1
This family of proteins are subunits of the adaptor protein complex AP-5.
Statistics
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PSSM-Id: 291662
Aligned: 17 rows
Threshold Bit Score: 204.101
Created: 24-Jul-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_006629156   1 MVHSFLIHTLcpv--gaL-----S-------C-----TESRVLYSRVFG------AD---LTQtgPAGDREQESEARRLL 52  spotted gar
XP_003227913  34 MVHAFIVHTL-------R-----SwgrsgdeA-----PPCRVLYSRVFS------PE-----R--PEGGGGRDPEKERLA 83  green anole
NP_001107332   1 MVYGFVIHTV-------GatldeT-------P-----NSSRVLYSKVFN------YDm--LDQ--KQNSDEQYLHNERIK 51  western clawed ...
XP_003730604   1 MVYAFIIHTL-------------P-------P-----DTCRVLFSCTFG------LEdagVDD--HRIENEGDVTEMRTL 47  purple sea urchin
XP_011438995   1 MVYAFVIHTL-------L-------------P-----GPCRVLYHNVYG------------QD--ATYSDEVNDAEHKNR 41  Pacific oyster
XP_003384843   1 MVFAFLCHSI-------------A-------A-----TPVRLLYSAVYG------ED----MQ--TALKENVPVEDFRMT 43  Amphimedon quee...
XP_002587995   1 MVRSVIIQTV-------------T-------P-----GPCRVLYAQMYG------------CA--GDQTGSLAQTAARGR 41  Florida lancelet
XP_003983731   1 MVHAFLIHNL-------R-----A-------PqaqdtGLCRVLYSCIFG------AE----NS--PDDPRPHGAERDRLL 49  domestic cat
XP_001380448   1 MVHAFLIHTLsgsgqatG-----D-------A-----TFCRVLYSQVFG------SE----RL--PDEPGPRGPERDRLL 51  gray short-tail...
XP_002416012   1 MVLAFLILSV-------------S-------E-----KASGVIHSTAYSlnragtSH---SDE--SNTVRNEPDELEEDF 50  black-legged tick
XP_006629156  53 QKEQLAVVARQVRSVCALQR-EAAGRpGLHETGAVLGEEEAALQEA------DSGVLRLAEGDPFPR---EHTVVWLGVQ 122 spotted gar
XP_003227913  84 QKERILAVARQVDSVCKLHL-QAAGRpTWEPLAPAP-EDPSPLQDA------PSGAFRLPPGDPFPAaegERAVLWLGVH 155 green anole
NP_001107332  52 RKQRIAIVARQAESMCLLSR-QASGRp-ASDFIVHPTDEPIYLLEE------DVGVFSLPPGDVFTS---EKIVLWVSVF 120 western clawed ...
XP_003730604  48 RKEQMALVARQVQSEFSFQK-AVSERvTYSDGLSSGQED--WMRDA------ELGMFRLAAGDPFKT---EKIAVWLGAG 115 purple sea urchin
XP_011438995  42 RRNHIQLIANEVHSEYQFRR-AVQSRaVEDDIQRMGNDD--TLPDF------EFGCIRLPEGNPFTV---ERIALWLGAG 109 Pacific oyster
XP_003384843  44 RKEQLLQIACRVQSEVGFRK-GAKDRvLK---GYAIRDESIDGQSF------EKGLFRLSTDDPFPT---PKTVIWQVSD 110 Amphimedon quee...
XP_002587995  42 QKEQVATVARQVQSECSFQQhCAAADpVGEEVRRHLSQEGAVVPQ--------TGIFQMPPGEPFGT---KVFTVWQTAA 110 Florida lancelet
XP_003983731  50 RKEQILAVARQVESMCQLQQ-QASGRtSV-DLQLQSSDEPVPLHEA------PHGAFRLAAGDPFQE---PRTVVWLGVL 118 domestic cat
XP_001380448  52 RKEQLLAVARQAETACKLLQ-QASGRpP-TDLLPQSSDEPIPLQDA------PSGVFRLRPGDPFQE---AKVVVWLRLL 120 gray short-tail...
XP_002416012  51 QRGPSEMNEEHKAQSDLFKR-V--HQhVVEDMKSALHHTSIAGAEAslhpieKKGAFFLNDTD--SP---ESIVVWHSFG 122 black-legged tick
XP_006629156 123 ALGFVLVCEAHENLLLAEGTLRSLARHCLEHLRLLGTG-SEVLLKADRIEVLLHRLLPHGQLLFLNHRFKHSLDKEL 198 spotted gar
XP_003227913 156 SVAFALVCGPQENPLLAECALRSVARSLLDHLHLLGSG-SEVLLKADRTEAVLARFLPHGQLLFLNDQFVAGIEREV 231 green anole
NP_001107332 121 SLGFSLICDSQENLTLAECTLRTVVKYLVDSLKLLTNS-SNVVLKADKIEMSLDKFMPHGQLLFLNHQATQALEKEL 196 western clawed frog
XP_003730604 116 KTGFILVCETHENRLQVENQLRLLVKNLQEHVKAVRQP-IEVLEKGDRVMAVLHHFLPSGRIIFMNHALIKQTEKEL 191 purple sea urchin
XP_011438995 110 NSGFTLVCEKSENRLLAENVLKILIRFIQEHVRVINQP-SEARLKSDKIALILSRFLPNGNLLFMNHRVVRQLEKEV 185 Pacific oyster
XP_003384843 111 NCTFVLVCEQDENRILAETILSFIVQYSHAHIMNMDQKmAELLLKGEWLSSVLQVMLNNGQLMFMNSKVIKQLEKQL 187 Amphimedon queensl...
XP_002587995 111 NCGLALVCENHENRQQAAATLSQIFRLLRQHLRVLTQP-EEVLQKADRVAAILHHFLPQGQLLFLNSRAVRHKEKEL 186 Florida lancelet
XP_003983731 119 SLGFVLVLDAHENLLLAESTLRLLARLLLDHLRLLTPS-TNLLLRADRIEGILARFLPHGQLLFLNDQFVQGLEKEL 194 domestic cat
XP_001380448 121 SLGCALVCEPHENLLLAESTLRLLTRLLLEHLKLLSSG-SNVLLRGDRIEAILNHFLPQGQLLFLNDQFVQALEKEL 196 gray short-tailed ...
XP_002416012 123 DCCFVLMCDSDENVSLGGQILRQIIHSISCHVVFVT-P-SELLAKAGLVHAIVKLYLPAGKLLFVNQNVVKQYEQLL 197 black-legged tick
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