Conserved Protein Domain Family
Spatacsin_C

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pfam14649: Spatacsin_C (this model, PSSM-Id:291322 is obsolete and has been replaced by 464236)
Spatacsin C-terminus
This family includes the C-terminus of spatacsin.
Statistics
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PSSM-Id: 291322
Aligned: 41 rows
Threshold Bit Score: 275.208
Created: 30-Jun-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q170M8       1221 MLGNCLLKYCDAikqykqlekspepsrtesehsksgkvdkavleklrsifrgqmlSLKKQ-NT--I--IVALLVKAHDCF 1295 yellow fever ...
XP_002969877 1021 ELGHALMRLVIS---------------------------------------------GHD-MPhaC--EVELLILAHQFY 1052 Selaginella m...
XP_002307136 1035 EIGHALMRLVIT-------------------------------------------GQEIP-HA--C--EVELLILSHHFY 1066 black cottonwood
XP_009409341 2868 EIGHALMRLVMT-------------------------------------------GQEIP-HA--C--EVELLILSHHFY 2899 wild Malaysia...
XP_010319794 2825 EIGHALLRLVAT-------------------------------------------CQGIP-HA--C--EVELLILSHHFY 2856 tomato
XP_002463640 1040 EIGHALMRLVMT-------------------------------------------GHEVP-HA--C--EVELLILSHHFY 1071 sorghum
XP_001762558 1104 EIGHALMRLVIS-------------------------------------------GRDIP-HS--C--EVELIILAHHYY 1135 Physcomitrell...
XP_001779738 1111 EIGHALMRLVIS-------------------------------------------SRDLL-HP--C--EVELLILAFQYY 1142 Physcomitrell...
XP_001748245 2055 dVGHALLRLNAS-------------------------------------------KENGL-ET--SvsQVILMSAAYACF 2088 Monosiga brev...
XP_001304298 1710 SVGDHLFQRAKE-------------------------------------------LQGSQpIS--V--IVNLLLHSSMC- 1741 Trichomonas v...
Q170M8       1296 VHECSVEGIVEVLQRCKA-LNSVLTAAKSWNLIVKLLVGIGRYREMHYCFETLIKNDQFESLLGQ---------F----- 1360 yellow fever ...
XP_002969877 1053 ESSACLDGMDVLVALAAT-RVEAYVAEGDFSALARLVTGVSNFQALRFVLDLLIENGQLELLLKKraavdalkeS----- 1126 Selaginella m...
XP_002307136 1067 KSSACLDGVDVLVALAAT-RVEAYVSEGDFPCLARLITGVGNFHALNFILGILIENGQLDLLLQK---------Y----- 1131 black cottonwood
XP_009409341 2900 KSSACLDGVDVLVTLAAN-RVESYVLEGDFSCLARLVTGVSNFHALNFILNILIENGQLVLLLQK---------Y----- 2964 wild Malaysia...
XP_010319794 2857 KSSACLDGVDVLVDLAFK-KVEAYVSEGDFPCLARLVTGVGNFHALNFILGILIENGQLDLLLQK---------Fsaavd 2926 tomato
XP_002463640 1072 MSSSCLDGVDVLVTFAAN-RVESYVSEGDFSCLARLITGVSNFHSLSFILSILVENGQLELLLQK---------Y----- 1136 sorghum
XP_001762558 1136 ELSACLDGIDVLVSLVST-RVDLYVVEGEFALIARLVTGVSNFHRLRFILDVLIEHGSLQLLLQK---------Kpff-- 1203 Physcomitrell...
XP_001779738 1143 VSSECLDGLDVLVGFAAT-RVDSYNSEADFASLTRLVVGLHSLPALRFILDILVENGQLELLLQK---------T----- 1207 Physcomitrell...
XP_001748245 2089 KLGCDMRGLQRVHFHVQNnLVPRLEAEGDYRNMMKLVMGLKTYRRLEYVFDHLYKHHQLEVMLGS---------S----- 2154 Monosiga brev...
XP_001304298 1742 --TSDIDECAEMLDHI----LDKLVEEKQLSLIINIVTIFKDPALLPRYFQHLIAQEKLDALPHS---------T----- 1801 Trichomonas v...
Q170M8       1361 ----D----------EK-----HT---------NgLKTAIISYLNEHCPAQKEFFRLAALHFLMYKEIAEMWETEAKSAI 1412 yellow fever ...
XP_002969877 1127 ----S----------AS-----VR---------G-FRMAVISALKHFNPHDLDAFGMVFSHFSMAHEMANLLESRGRKGL 1177 Selaginella m...
XP_002307136 1132 ----SaaaetnvetaEA-----VR---------G-FRMAVLTSLKHFNPEDHDAFAMVYNHFDMKHETAALLESRAWQSS 1192 black cottonwood
XP_009409341 2965 ----Staema-tgtaAA-----VR---------G-FRMAVLTSLKLFNPHDLDAFAMVYNHFDMKHETASLLESRSLQYM 3024 wild Malaysia...
XP_010319794 2927 andaD----------EE-----VR---------G-FRMAVLTLLKQFNPNDLDAFAMVYSRFDMKNETASLLESRAHQSC 2981 tomato
XP_002463640 1137 ----S----------AT-----DTatgtpasvrG-FRMAVITSLKQFNPNDDDALSMVYKHFDMKHEAASLLELRAEQYM 1196 sorghum
XP_001762558 1204 -dpaI----------EA-----SPls-----vrG-FCMAVLAALKRFNVNDQDALMQVYNHFNMPQEMAILLLLRARKSV 1261 Physcomitrell...
XP_001779738 1208 ----Twldf---vdaDR-----AArca----vqG-FHMGILSALNHFSTFDQDAFAMVYAQFNMTYENAALLKKRAQRGV 1270 Physcomitrell...
XP_001748245 2155 ----T----------RDlsateQA---------E-YKTALVDFFQRRYPEDTDAFEMLALRFSLDYEIGQSRLKNARRIA 2210 Monosiga brev...
XP_001304298 1802 ----L-----------------SK---------K-VGRVIMNCARHVQPFEPQKYFDLTLNYMLYRDHAELRMECGLRLL 1850 Trichomonas v...
Q170M8       1413 AKVLSthekssapvsgspragiPRLACTPLVVSELNGAMESYMHAAENYLLDNKMNLAQRTASNAELVALQIYLINqama 1492 yellow fever ...
XP_002969877 1178 TR---------------------SIRNDPEQNEEVLEIMRFFVEASEVYAGIDCGNKTRWCCAQASLLSLQLRMPE---- 1232 Selaginella m...
XP_002307136 1193 EQW-------------------FRRYDKDQ-NEDLLESMRYFIEAAEVHSSIDAGNKTRGACAHASLVSLQIRMPD---- 1248 black cottonwood
XP_009409341 3025 QQWLS-------------------CRDKDLRTEYLLDAMCHYIEAAEVLSGIDAGQKTHNACAQASLLSLQIRIPD---- 3081 wild Malaysia...
XP_010319794 2982 KEW--------------------SLHSDKDQTDELLASMGYFIEAAEVYSSIDAGSKTRQSCAQALLLYLQIRMPD---- 3037 tomato
XP_002463640 1197 NSWLS-------------------RYDKERRNDELLEAMHHLVETAEVLSTIDAGQRTHRACARASLLSLQIRIPD---- 1253 sorghum
XP_001762558 1262 EKWVD-----------------PA---DPEYGEDVLESMRLYVEAAEAFSNISAGMNTSMCCAQASLLSLQLRMPE---- 1317 Physcomitrell...
XP_001779738 1271 EWWVK-----------------HPH---PESSEELLDTMRLFVEAADLYLTEEAGNSTSWCCAQASMISLQLRMPE---- 1326 Physcomitrell...
XP_001748245 2211 QK-------------------------PNLKFDDLELSIQMLREAAVKFDKAACPQLVRECLLLARIVGLQAQLq----- 2260 Monosiga brev...
XP_001304298 1851 R--------------------------GSPDKNKLQEASSHFLLALAYFLHEKCYSLSMECLKKLSLISLQLEVPD---- 1900 Trichomonas v...
Q170M8       1493 dktgqgeqhqfcYSVLNIKDPE--SFVYNALSVPQALIVSRTYECEI--NWTTALYQHYILSGEL-G-YLEDFLDRMPLT 1566 yellow fever ...
XP_002969877 1233 ------------IMWLNLTETNarRLLVDQRRFQEALIVAEAYGLNQpaEWVPVLWNQVLSPGWI-EhFLTEFVASLPLR 1299 Selaginella m...
XP_002307136 1249 ------------CQWLNLSETNarRLLVEQSYFQEALIVAEAYGLNQpsEWALVLWNQMLKPELIeE-FVAEFVAVLPLQ 1315 black cottonwood
XP_009409341 3082 ------------INWIALPETKarRVLVEQSRFQEALIVAEAYKLNQpsEWAPVLWNQMLKPDLI-EqFVAEFVAVLPLQ 3148 wild Malaysia...
XP_010319794 3038 ------------LHFINLSETNarRALVEQTRFQEALIVAEAYGLNQpgEWALVLWNQMLRPELI-ErFMAEFVCVLPLQ 3104 tomato
XP_002463640 1254 ------------LMWIGLSETNarRIFVEQSRFQEALIVAEAYNINQpiEWAPVFWNQMLKPDLI-EqFVAEFVSVLPLQ 1320 sorghum
XP_001762558 1318 ------------LTWLNLSETNarRRLVERPRFEEALIVAKAYDLNQteEWVPVLWNQMLQPGRI-DqYLSDFVEFLPLP 1384 Physcomitrell...
XP_001779738 1327 ------------LMWLNLTETNarRLLVDQPRFAEALIVAEAYDLNQstEWVPVLWNQMLQSSRI-DqFLNDFVDILPLP 1393 Physcomitrell...
XP_001748245 2261 ------------PNVLDLSRSEleQFLVSHGAYPEASIVAQYYGADNptVWLRPVFHQVVELGNV-D-YWTDCAQGNMFE 2326 Monosiga brev...
XP_001304298 1901 ------------MNVLHLDESQvlHLMKTK-DFPFALTTAVAYDMDTevNWAEAIFTQSVQNKGE-E-FLTAFQYFRPLT 1965 Trichomonas v...
Q170M8       1567 DEMVEALVRKFQQ 1579 yellow fever mosquito
XP_002969877 1300 PSMLMELARIYRS 1312 Selaginella moellendorffii
XP_002307136 1316 PSMLVELARFYRA 1328 black cottonwood
XP_009409341 3149 PTMLLELARYYRS 3161 wild Malaysian banana
XP_010319794 3105 PSMLLELARFYRA 3117 tomato
XP_002463640 1321 PPMLLELARFYRA 1333 sorghum
XP_001762558 1385 FSMLMELARFYRA 1397 Physcomitrella patens
XP_001779738 1394 ATMLLELARFYRA 1406 Physcomitrella patens
XP_001748245 2327 ASFYRSVVDLYLK 2339 Monosiga brevicollis MX1
XP_001304298 1966 SNLCSQVVKMYKe 1978 Trichomonas vaginalis G3
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