Conserved Protein Domain Family
ABC2_membrane_4

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pfam12730: ABC2_membrane_4 (this model, PSSM-Id:289500 is obsolete and has been replaced by 403819)
ABC-2 family transporter protein
This family is related to the ABC-2 membrane transporter family pfam01061.
Statistics
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PSSM-Id: 289500
Aligned: 288 rows
Threshold Bit Score: 28.9459
Created: 14-Jul-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q893L6         6 YSEFLKL-KKSPIFLLLIIGA-IAEPLLMF--------------------FGELFRGDi--------------------- 42  Clostridium tetani
Q0AUS1         5 IKELWDLrWRGTILLFLTLLT-GYFVLSNY--------------------EWFKTVADiaqieqglkqapflnqlfdmet 63  Syntrophomonas ...
Q186M5         6 KAEMIKI-LKSKSVWIIWLFL-----IFFGf------------------fLIRKFDVL---------------------- 39  Peptoclostridiu...
WP_012200007   6 KLELRKI-LFKKSILITWAAS-----LLLG--------------------MVLIHNGSvs-------------------- 39  Clostridium phy...
WP_011948652   6 KFEMKKM-----LLRLGVIIPwILVAMLST--------------------ILLNTAGN---------------------- 38  Clostridium bot...
WP_010963610   8 KLEFMKF-RKSLIKFLFLFPV-LLSTSMLC--------------------IGLYFRKK---------------------- 43  Clostridium ace...
WP_000773443  10 KENIRDL-YSSGVIYLGLIIS-FIPPILLT--------------------FFILKTQGts-------------------- 47  Streptococcus p...
WP_012775617   5 RSEYLKF-IYNK--WLLLTVL-ATIILVPL--------------------FVIFLHETps-------------------- 40  Streptococcus suis
WP_004814435  12 SVEISKL-FNFKNFISLFLII-LVSNALVLwifntdstdneedikieekmNSASTWKDkakvqieanktledvigkdkvk 89  Anaerococcus hy...
WP_011986748   6 ICELKKF-KRI---WIPLIIG-VFIVIQFS--------------------SVTLNTSVmkna-----------------d 43  Clostridium bot...
Q893L6        43 --vEWERYMgniqamtFL---------IVGL-----LLFTLIASY----IYArEFTEKVVYTAYSYPASKTKIFICKLIT 102 Clostridium tetani
Q0AUS1        64 lnqQLLELFnn---idFYiwsqwfgknLYQLi---lLAIIILTFP----LFA-RETEQNTNYFLLSNRTRKQIFLSKILA 132 Syntrophomonas ...
Q186M5        40 ---DTYADIf-----yKIe-------gSIPLig--lIMFIITSGN----YIK-EYDSNMTGLINTTKKGKKSVVLSKLVA 97  Peptoclostridiu...
WP_012200007  40 -dvYADVFF-------KS---------YGYTpimglVMFMILSGA----YTL-EYNSNMNELINTTKNGKKKLVIAKGIG 97  Clostridium phy...
WP_011948652  39 ---DVVEIYa-----sVFdk------sYGIApliglLTFTIVSGS----YTK-EYDNNMVGLINSTKNGKRNIVKAKAIA 99  Clostridium bot...
WP_010963610  44 ---SFIAYGglknsfsSLlfanhsmlaWHIIl---lLFVISISIY----VFYiETSNDSLTSICSSNLKRRNIYLAKWML 113 Clostridium ace...
WP_000773443  48 --lGIKHIS-------NF---------YAMLg---mLMAVIHANR----IISrDFSHNTISLFYNQQKNRMIYLLSNFLY 102 Streptococcus p...
WP_012775617  41 -yiTENYALt-----qILes------fYLGQ-----AGIIIITIL----FIGqEFNDSTLRSSLLANPIRWKFFFIKLIV 99  Streptococcus suis
WP_004814435  90 mnnDILKYRidndiapVKghssyeylnYTSNyi--nIAVLIFIIYlsskLYGlEIENKMEDYIYSQKFSRFYSFNTKIIA 167 Anaerococcus hy...
WP_011986748  44 dlfTWINLT-------VF---------SYGFl---aAINMLIAYM----FIW-EFNNNTMLSMLTYKHKRWKVFVGKIIS 99  Clostridium bot...
Q893L6       103 VISCIAFVYVLQFIT-ILITG----SIIDHEPLT-------MDFLiln----ikIYCYSLLFQF-AIVPLAIFI----AS 161 Clostridium tetani
Q0AUS1       133 SFFSIFLIIAAGSIL-PVIIAl---FNEFNFSLE-------QALM---------YGLQLSISSL-FLYSVVVFF----SI 187 Syntrophomonas ...
Q186M5        98 NGLILSIINISFILL-VGIRGf---SFFDFKNLNep----iHNLWyfg---nsnLNLTVIQMYI-IVILTTIFA----SF 161 Peptoclostridiu...
WP_012200007  98 AGLATSIVNSSMVMA-IYLDGlrkvRFEGLDMPL-------KDLWy--------FKGINSNLNV-LQMMIILMI----SV 156 Clostridium phy...
WP_011948652 100 AGIAVSIVNLSIVLI-IYLSAl---RKTGGKGLDlp----lKSLWyfeksgsniKVYQMMIIMI-VTVIIGSFIfaqiGL 170 Clostridium bot...
WP_010963610 114 LMLSTILMILIGVCI-LVVEAk---IFNIPFTFN-------DGVIv-------rYISFELLCSL-GLVSFQLFL----IS 170 Clostridium ace...
WP_000773443 103 AISVSIIYALNGIVL-LVIVS----KLGIPGDLG-------LDFI-----------VAIVVNTI-LLVLFYFLL----SY 154 Streptococcus p...
WP_012775617 100 ILSISVLVWSLVTVC-TIFVV----YIFYSLLIP-------GFIYt--------IAVRIMLVSI-GLILICFSL----VL 154 Streptococcus suis
WP_004814435 168 LLISVVAIIAVSSLItFIAGGl---FYGFEGGFKktvfyfsHNVYehtylvhslINIAFWLITAiFLSIITFAL----TE 240 Anaerococcus hy...
WP_011986748 100 AILISLLLYIVEFLM-LTLMNy---ISFRDTLTR-------AVMIkh-----lmITLKSFFFQM-LMITVTASL----AI 158 Clostridium bot...
Q893L6       162 ISK------NLIV---------PMGYSVIGTIITI---------FISGLKEYSayfpl-yypamPVLSVVKKEMKVAIHS 216 Clostridium tetani
Q0AUS1       188 IFN------DVIK---------PVIASVIVFVALGl--------MGKISGMLY-----------LNIYRYMTGVDIFFTS 233 Syntrophomonas ...
Q186M5       162 IFA-------------------QIGLTLSSIFKSAvi-----pfILGGLIMAIpyfs---vgfiPDKAIKFMSVTPNWIM 214 Peptoclostridiu...
WP_012200007 157 ILA-------------------SFFFSQLGLYLSSisksasipfLVGGLIMGIpyil---epfiPSKFIAITPLWGMMSS 214 Clostridium phy...
WP_011948652 171 LLS------SISKsavipfifgGLIMGIPYLLEGFl-------vRAGNKGSFLpytpl-wgmysSQIVRHKASMGMALGT 236 Clostridium bot...
WP_010963610 171 LLK------DITT---------STIVSLLAAVGFNai------hLSDGLIPYIpy--------------lYFSNSTPFSN 215 Clostridium ace...
WP_000773443 155 IFYlyklksGLVF---------GILVALLLFIPNIlnt----mmMNTSNDLFIkai------elLPFYSLPVFVTSNTMS 215 Streptococcus p...
WP_012775617 155 ITR------SIVV---------PMGIS-LSFLLGLgq------mLLQFSDAFLyfp------------iiSTMNSFFTTE 200 Streptococcus suis
WP_004814435 241 ISK------NSLI---------SRIISILYFLLGFsl-----snKLIDLKVDSkiisytflpyaNISNFLNTPINDYFTF 300 Anaerococcus hy...
WP_011986748 159 VSK------KIIV---------PVIYIGIQLVASFmf------lSEPAVRAFIpfp-----lpvISNLMLISNHHKIIKD 212 Clostridium bot...
Q893L6       217 HSIV------IAIMFFIIT--SLLCII 235 Clostridium tetani
Q0AUS1       234 SIQT------TAMIVILIL--ALFILM 252 Syntrophomonas wolfei subsp. wolfei str. Goettingen G311
Q186M5       215 MSQQmvkynvPSILIVFSIviSIILMI 241 Peptoclostridium difficile 630
WP_012200007 215 QLVKy----eVSTGIMIIQ--LVIFIV 235 Clostridium phytofermentans
WP_011948652 237 LAVI-----------FIIA--MTVLSK 250 Clostridium botulinum
WP_010963610 216 TTILr-----QSIIVSLIY--CVLFLI 235 Clostridium acetobutylicum
WP_000773443 216 ISQY----------LVVIT--TIILLY 230 Streptococcus pneumoniae
WP_012775617 201 NQPYl----pSTIGIAIQFlwGILLLS 223 Streptococcus suis
WP_004814435 301 TKGI---------IIIFIL--GILMYI 316 Anaerococcus hydrogenalis
WP_011986748 213 ISIMp-----SQVIIAAVM--FIGGIA 232 Clostridium botulinum
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