Conserved Protein Domain Family
G-patch_2

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pfam12656: G-patch_2 (this model, PSSM-Id:289427 is obsolete and has been replaced by 432700)
DExH-box splicing factor binding site
Yeast Spp2, a G-patch protein and spliceosome component, interacts with the ATP-dependent DExH-box splicing factor Prp2. As this interaction involves the G-patch sequence in Spp2 and is required for the recruitment of Prp2 to the spliceosome before the first catalytic step of splicing, it is proposed that Spp2 might be an accessory factor that confers spliceosome specificity on Prp2.
Statistics
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PSSM-Id: 289427
Aligned: 60 rows
Threshold Bit Score: 50.8075
Created: 14-Jul-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
O43031       164 NVVNEKDAYRKDIDELPEPSNMK--D--YSEIPVEEFGAAMLRGMGWN-GQLSSKD------AFDVNQRPT-FLGMGAKP 231 Schizosaccharom...
Q5CPI8        99 IEILLNKKNSSNDTNEDDLDSSTnkD--NFRIPVDKFGIAMLRGMGYNpEIHNTKPk-------IFKKRNYnQSGLGADK 169 Cryptosporidium...
Q21924       123 GENEEESGKGEKIVVEDGRGDTEdaD--YSAIPIESFGLAILRGCNWKdGDGIGKNpqk-vaLKLPNRRPP-GLGLGATP 198 Caenorhabditis ...
Q16LD9       133 DSMVVPLKPEDLPLDGGRESTMD--D--YESVPIEKFGLAMLRGMGWKeDPNAPKKsd--kfPEGPVQRPK-GMGLGAER 205 yellow fever mo...
XP_001864963 132 dNFVVPLKPEDLPLEGARESTLD--D--YEAIPIESFGMAMLRGMGFKeDPAKKKDkddkllPEGPMMRPK-GLGLGAER 206 southern house ...
XP_002014156 132 klVLPAVKADDLPLEGAKEASLD--D--YESIPIQQFGLAMLRGMGWVdPPP--KKkgsapvDEAPFLRPK-GMGLGADK 204 Drosophila pers...
XP_001689338 126 aNFVVPLRAELRLEDSARQSNLD--D--YESVPIEQFGVAMLRGMGFTgDPTSESDk----lTPGPELRPK-GLGLGADK 196 Anopheles gambi...
XP_001608907 194 IEQASNTVPILLRGKRDHEDTDV--EpsYENVAVEEFGLAMLLGMGFNpATNTNK-------PKEYKRRAYdRAGLGADA 264 Babesia bovis T2Bo
XP_002140138 110 lkrKNQKQNEANDSLSKTSSELVylK--ESKIPIDSFGMAMLKGMGYDpSIHKTR-------PKLYKKRTYdQGGLGSDL 180 Cryptosporidium...
KFG60550     318 tETSEKELLQEELNLLPDALSATsaE--YSRIPVSEFGLAMLRGMGYDaEKKEETTkg----aAPKRKRTYnRAGLGSEE 391 Toxoplasma gond...
O43031       232 VDSE 235 Schizosaccharomyces pombe 972h-
Q5CPI8       170 EIGS 173 Cryptosporidium parvum
Q21924       199 KNPV 202 Caenorhabditis elegans
Q16LD9       206 APKD 209 yellow fever mosquito
XP_001864963 207 APKD 210 southern house mosquito
XP_002014156 205 ALKP 208 Drosophila persimilis
XP_001689338 197 TIKG 200 Anopheles gambiae str. PEST
XP_001608907 265 HMKr 268 Babesia bovis T2Bo
XP_002140138 181 IIDS 184 Cryptosporidium muris RN66
KFG60550     392 EVer 395 Toxoplasma gondii RUB
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