Conserved Protein Domain Family
ApoB100_C

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pfam12491: ApoB100_C (this model, PSSM-Id:289274 is obsolete and has been replaced by 463606)
Apolipoprotein B100 C terminal
This domain family is found in eukaryotes, and is approximately 60 amino acids in length. There are two conserved sequence motifs: QLS and LIDL. ApoB100 has an essential role in the assembly and secretion of triglyceride-rich lipoproteins and lipids transport.
Statistics
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PSSM-Id: 289274
Aligned: 17 rows
Threshold Bit Score: 82.7957
Created: 15-Jul-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P11682        291 QVKAKLQEIYGQLSDSQEKLINVAKMLIDLTVEKYSTFMKYIFELLRWFEQATADSI 347  chicken
XP_009182013 4488 QFRYKLQDFSDQLSDYYEKFIAESKRLIDLSIQNYHTFLIYIMELLKKLQSTTVMNP 4544 olive baboon
XP_005674500 3866 QFIYKLQDFSDQLSDYYEKFIAETERLIDLSIQKYHMFLRYIMKLLKELQSDTVNDM 3922 pig
XP_001501729 4527 QFIYKLQDFPDQLSDYYEKFIAESQRLIDLSIQIYHVFVKYIAELLKELQLATVNDM 4583 horse
XP_008253005 4500 QFRYKLQDLSDQLCDYPEKLVAESKRLIDLSIQSYHMFLRYVTELLKELQLAAVNDM 4556 rabbit
XP_004745940 4365 QFRYKLQDFSEQLSEYNEKFITESKRLIDLFIQKYHMFLTYITELLKEIQLTTVNNM 4421 domestic ferret
EOB06209     4455 QVKAKLQEIYEQLSDSQEKLIGEAKKLIDLTIEKYSALLQYISELLRWLEQVTADSI 4511 mallard
XP_006091772 4485 QFKDILQNFSDRLFDYYEKFIAESQILIDLSIQTYHMFLIYITGLLKELQSTTVYDL 4541 little brown bat
XP_004175032 4489 QLKEKLREIYGQISQSQEKLISEAKRLIDLTIENYSAFLQYLSELLRWLEQVTAESI 4545 zebra finch
ETE64141     4167 QVKAKLQESYNHLLDSYETLISETKRLVDLTIEKYTTFFQYLQKLLDWLEKVTADTL 4223 king cobra
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