Conserved Protein Domain Family
GIDE
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pfam12483: GIDE (this model, PSSM-Id:289266 is obsolete and has been replaced by 403620)
E3 Ubiquitin ligase
This domain family is found in bacteria, archaea and eukaryotes, and is typically between 150 and 163 amino acids in length. There is a single completely conserved residue E that may be functionally important. GIDE is an E3 ubiquitin ligase which is involved in inducing apoptosis.
Links
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Statistics
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PSSM-Id: 289266
Aligned: 25 rows
Threshold Bit Score: 97.4641
Created: 15-Jul-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Q2JPV3       267 STGREYLLE---Re-----TR-TRDETLHSVVRQIPFFIEDETGRVRV--DPTGAEIEAMSVVDEhI----FPg-K-GpS 329 Synechococcus s...
Q1ATI9        83 VVREYLERD---RgdgapgSG-RRSEVLARSERFAPFVVEDDTGGVPV--SAEGAEVDAKKVVDR-F----ERg-A-GaA 149 Rubrobacter xyl...
WP_012626550  95 EERLTERDN---DgetrekTQ-RGSETIASNSQSTPFFLQDQSGAIEV--DPSGAAIETVQVLNE-F----RPe-A-G-S 160 Cyanothece sp. ...
WP_012164080  93 EEQVTERDS---DdkvvtkTQ-RGSETLSQNRESVPFFLQDDTGEIWV--EPEGAQIETVRVLDE-F----SPe-Q-P-S 158 Acaryochloris m...
WP_012872822  86 EYEYRRRNA---Kge---tVRsRRSETVAHNEQFTPFYVEDSSGRVLV--DPEGAEVDAQKLVDR-F----ERn-P-G-A 149 Sphaerobacter t...
WP_012190445  93 sEVVHDTDSegrKrt---rTQ-TGSETIKSEEECAYFWINDNFGKVWV--DPTDAEIEYEAGQNI-L----LPs-P-D-K 158 Herpetosiphon a...
WP_012795982  94 YEVIEYRDG---Kr----hRR-KRTERVAEHTSAQNYAVIDEEGRTIGvdPNGTKPDSVEQTVSR-F----EPh-R-GnS 158 Saccharomonospo...
ACM05468      80 TERVVERHG---Rsk---kGG-RLSEVVAQNEQRIAFEVDDGTGRVAV--DPVGAEIDGRKLLDR-F----EPv-EnG-E 143 Thermomicrobium...
WP_012375264  86 TETYTDKEG---KsrtrtrHE-SGWTTVAHGGETQDFYLRDDTGAVLI--RPAGAKVEAQTLFEQ-TvnrgDPlyY-A-K 156 Opitutus terrae
WP_012822909  88 VSVEHREQS---Fge---sKR-SDWRRIYQHESDNLIAVEDATGECLV--DPESASI--RPNMRR------QWy-G-A-T 147 Halothiobacillu...

Q2JPV3       330 -RFNFNLKryl------sgvR--T------EnrsTRAFIYKEWVIPVDAMAFTMGQV-RFEAGD-PVIRKP-L---Sg-e 387 Synechococcus s...
Q1ATI9       150 -GLSVTIGgatid---lgggE--R----------TLGYRHTEEILPVDAPVYVLGAVrRDG-----GIGPP-E---Egag 204 Rubrobacter xyl...
WP_012626550 161 -A-RISFGnfs------lsvG--GsfpagrE---TIGYRYRESILPPDRRILIVATA-SDSSGI-LSLQKPvE---Kr-q 221 Cyanothece sp. ...
WP_012164080 159 -GGQLSFGgfslsl-ssaetG--R------Q---TIGYRYQESVLPVQRQVFVVAQV-SDFNQS-LVLENPtT---Kg-q 219 Acaryochloris m...
WP_012872822 150 lGPTISLGgis------lnlGgdD------G---TIGYRYQEHVLPVDIPVYVLGVVqEGG-----TIGRP-PaalKg-r 207 Sphaerobacter t...
WP_012190445 159 -ASILHFGdfefaapasnkgA--R------R---TTGYRAQEELFTDDGRAYILGCVtDDEGEP-TIAYHE-K---Kl-d 220 Herpetosiphon a...
WP_012795982 159 -QSIELFGfklpt---mlgrG--D------S---TIGYDYKEWVIRPGQRLYILGEVh-DRFGP-LMIGKP-A---Qg-g 216 Saccharomonospo...
ACM05468     144 -GATLRIAgmsve---vraaE--W------R---TLGYRKIEEAVLVGYPVYVLGVLqDDG-----SIGRP-P---Eg-s 198 Thermomicrobium...
WP_012375264 157 -GPDHAVAnsd------------------------hrrRFVERGLALHTSLYVVGQArERADVVaPEIAQD-R---Na-p 206 Opitutus terrae
WP_012822909 148 eRPSGVTNsvg------ghfF--G------------DYRYTEKLLLPHRNLYVLGWFkTIAHd----------------- 190 Halothiobacillu...

Q2JPV3       388 R---FMIAPKSPEALLEEQRSNASSYLVGSVVL---LGIG 421 Synechococcus sp. JA-2-3B'a(2-13)
Q1ATI9       205 R---FVVSWRSEEALGESLGRGARLLGLIALGLf-lAGAA 240 Rubrobacter xylanophilus DSM 9941
WP_012626550 222 K---FIISLKSEDHLAQSTQQTATYTFYGMIAClglGAIL 258 Cyanothece sp. PCC 7425
WP_012164080 220 R---FVISLKSEEALAQTTQTSVTYAFYGMISTlvvGGLL 256 Acaryochloris marina
WP_012872822 208 R---FIISYRAEEALRESWGKKARWLGISAVALfalAVIL 244 Sphaerobacter thermophilus
WP_012190445 221 R---MLVSRKTERELANSAAGWSRNLYYGAAGSavaGIIF 257 Herpetosiphon aurantiacus
WP_012795982 217 H---FIISTRTEEELRASRVKRHKLLAITVITSfvlGWVL 253 Saccharomonospora viridis
ACM05468     199 RlreFLISARSEEELATSLRRRSYLFLAGAITSfvvAGml 238 Thermomicrobium roseum DSM 5159
WP_012375264 207 L---FLISTRTERSVQTRLA----VGSWVCWALglvAAVG 239 Opitutus terrae
WP_012822909 191 P---YVVENESVASLLRAWKHDPQMMKTFDLdgngsidsk 227 Halothiobacillus neapolitanus
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