3BRV


Conserved Protein Domain Family
NEMO

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pfam11577: NEMO (this model, PSSM-Id:288434 is obsolete and has been replaced by 431942)
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NF-kappa-B essential modulator NEMO
NEMO is a regulatory protein which is part of the IKK complex along with the catalytic IKKalpha and beta kinases. The IKK complex phosphorylates IkappaB targeting it for degradation which results in the release of NF-kappaB which initiates the inflammatory response, cell proliferation or cell differentiation. NEMO activates the IKK complex's activity by associating with the unphosphorylated IKK kinase C termini.The core domain of NEMO is a dimer which binds to two fragments of IKK.
Statistics
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PSSM-Id: 288434
Aligned: 7 rows
Threshold Bit Score: 62.5035
Created: 27-Jun-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3BRV_B         3 EQGAPETLQRCLEENQELRDAIRQSNQILRERCEELLHFQASQREEKEFLMCKFQEARKLVERLGLEK 70  human
Q90Z16        37 PEEMVQQMKELITENNELKEAMKLHNQAMKDRYEELSIWREKQKEEREFYETKFKEAKQCLLAKCVEN 104 chicken
Q8VC91        44 EQGTPETLQRCLEENQELRDAIRQSNQMLRERCEELLHFQVSQREEKEFLMCKFQEARKLVERLSLEK 111 house mouse
AAH91820      43 DLAGNEIVQKLITDNHQLREALKRSNDALKERCEEMEGWQRRSREEREFLSCRFREARELVQRLAQEN 110 zebrafish
XP_009298224  26 LEETLQQMNTLIKENRDLKEALKQTNLSMKERFEGLSAWKEKQKEERDFLEQRLEEARTRLNTMDVEN 93  zebrafish
XP_002935287  42 DAEMLEQIKQLLMENNNLKETMKQMNQEMKERLEELLKRHNQHLLDLNSENELLRKELNSLREKNATs 109 western clawed frog
Q3ZC32        37 PHELLQQMRELLIENHQLKEAMKLNNQAMKGRFEELSAWTEKQKEERLYFETQSKEAKERLTALSLEN 104 cattle
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