2C52


Conserved Protein Domain Family
Nuc_rec_co-act

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pfam08815: Nuc_rec_co-act (this model, PSSM-Id:285967 is obsolete and has been replaced by 462608)
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Nuclear receptor coactivator
This region is found on eukaryotic nuclear receptor coactivators and forms an alpha helical structure.
Statistics
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PSSM-Id: 285967
Aligned: 12 rows
Threshold Bit Score: 63.9684
Created: 14-Jul-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2C52_B          5 EGRNDEKALLEQLVSFLSGKDetELAELDRALGIDKLV-QGGGLDVL-S 51   human
BAG60730      159 ESPSDEGALLDQLYLALRNFD--GLEEIDRALGIPELVsQSQAVDPE-Q 204  human
XP_006639632 1090 EGQSDERALLDQLDSLLNNTDvmALEEIDRALGIPDLVsQGQGVDPQ-S 1137 spotted gar
AAI63724     1061 EGPADEGALLSQLYSALKDFD--GLEEIDRALGIPALVgQAQPVEQD-Q 1106 zebrafish
XP_004081302 1064 gSTVDEGALMSQLYTALKDFD--GLEEIDRALGIPALVeQSQSLEPD-H 1109 Japanese medaka
CAF97770     1009 ESQPDEGALLNQLCSVLKDYE--GLEEIDKMLGIPTLAgQAPLPDQD-Q 1054 spotted green pufferfish
AAT47737      376 EGRNDEKALLEQLVSFLSGKDetELAELDRALGIDKLV-QGGGLDVL-S 422  human
CBN81031     1052 EGPPDERALLDQLDSLLNTADviALQEIDRALGIPEIVgQGQCP----P 1096 European seabass
XP_011473682 1098 EGPGDDRALLDQLDSLLNNADviTLHEIDKALGIPEIVgQAHGPEGhql 1146 Japanese medaka
XP_007245506  880 EGRNDEKALLDQLVSFLSGTDesELAELDRALGIDKIV-QSGCLDQI-T 926  Mexican tetra
CAG12951      735 EARNDEKALIEQLVTFLSGTDesELAELDKALGIDKLV-QSGCFDSLgQ 782  spotted green pufferfish
O09000       1052 EGQSDERALLDQLHTFLSNTDatGLEEIDRALGIPELVnQGQALESK-Q 1099 house mouse
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