4F3L


Conserved Protein Domain Family
PAS_3
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pfam08447: PAS_3 (this model, PSSM-Id:285623 is obsolete and has been replaced by 430001)
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PAS fold
The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs. The PAS fold appears in archaea, eubacteria and eukarya.
Links
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Statistics
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PSSM-Id: 285623
Aligned: 123 rows
Threshold Bit Score: 41.9404
Created: 27-Jun-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
4F3L_A  263 FLFLDHRAPPIIGYLPFEVLGT--SGYDYYHVDDLENLAKCHEHLM---QYGK-GKSCY--YRFLTKGQQWIWLQTHYYI 334  house mouse
Q86HM4  305 VINCSNSFCELLGYSQNELIGK--PWTEITHPNLIEKTMNLFQQHRldlSEKK-SFELA--QVYKHRDGSIFSTIDTHTI 379  Dictyostelium disco...
Q8TSN6  970 VTDANDKFLEIVGYTREDLQAGriKWDRMTPPEYRLLDELCIKELKttgFSNA-PFEKE--Y--IRKDGSHVPIILGIAT 1044 Methanosarcina acet...
Q8TIW4  408 LEFVKGSVEEITGYSEEELMSKk-QWKKLVEKEDLPLFLKKEKEVK---NAPS-PYYGKlsYRIRCKDGKIKWVHEVYQK 482  Methanosarcina acet...
Q8TT20  347 PVSMQGPVEKMTGYRKEDLLSEkvSLMELIVPEDQHLIIENQQKLK---SNPKfVAENE--FRIRKKNGELIWVREITRS 421  Methanosarcina acet...
Q8PW25  318 TVFIDGDVEEITGYSTEDFLSHrvKWADLVLPEDQYLIFERINRSV---SNPDhSIETE--YRIKRKNGEIRWIREFLQK 392  Methanosarcina mazei
Q8TT21  330 PVFMDGAVEEITGYSKEDFLSRkvKWVELILPEYLPLFFDNMNKAV---SNPDlSRELE--YKIRRKDGETKWVREVLQK 404  Methanosarcina acet...
Q8TPR2  926 PVFAEGLLKEITGYSEEEFLSGkvRWDMIVKEEDRLRIFEDAEKLK---NIPGtIINRE--YRIRHKDGKVRWVNEIIQN 1000 Methanosarcina acet...
Q8PU41  708 PILVDGNVEEITGYRMEDLSLGkiDWYRIVHPDDRVKLFENREGLV---KDPFlFIEHD--YRIMHKGGEIKWVHEIFQN 782  Methanosarcina mazei
Q8TQS0  723 LILIDGNTEETTGYRREDFLSGktNWYQLVHPADVGRLFENRNRLV---NDPWlLIEHE--YRIRHRDGKIRWVREIIQN 797  Methanosarcina acet...

4F3L_A  335 tYh-QWNSRPEFIVCTH 350  house mouse
Q86HM4  380 -IsdSDNTRAICDLVTI 395  Dictyostelium discoideum
Q8TSN6 1045 -F----DHARCEGIAFV 1056 Methanosarcina acetivorans
Q8TIW4  483 -Ip-GKDGKFDSYQSTV 497  Methanosarcina acetivorans
Q8TT20  422 -Iq-GSSEGSGKFQGLV 436  Methanosarcina acetivorans
Q8PW25  393 -Fp-EESKNSRQFQGFI 407  Methanosarcina mazei
Q8TT21  405 -Lp-ERSRSQGRTQGLV 419  Methanosarcina acetivorans
Q8TPR2 1001 -Is-DSSGKPVLVQGSI 1015 Methanosarcina acetivorans
Q8PU41  783 -Vf-DSMGKKRILQGAA 797  Methanosarcina mazei
Q8TQS0  798 -Vf-DPSGRKRILQGII 812  Methanosarcina acetivorans
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