2LVX,3AIH


Conserved Protein Domain Family
PRKCSH

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pfam07915: PRKCSH (this model, PSSM-Id:285195 is obsolete and has been replaced by 400321)
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Glucosidase II beta subunit-like protein
The sequences found in this family are similar to a region found in the beta-subunit of glucosidase II, which is also known as protein kinase C substrate 80K-H (PRKCSH). The enzyme catalyzes the sequential removal of two alpha-1,3-linked glucose residues in the second step of N-linked oligosaccharide processing. The beta subunit is required for the solubility and stability of the heterodimeric enzyme, and is involved in retaining the enzyme within the endoplasmic reticulum. Mutations in the gene coding for PRKCSH have been found to be involved in the development of autosomal dominant polycystic liver disease (ADPLD), but the precise role the protein has in the pathogenesis of this disease is unknown. This family also includes an ER sensor for misfolded glycoproteins and is therefore likely to be a generic sugar binding domain.
Statistics
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PSSM-Id: 285195
Aligned: 102 rows
Threshold Bit Score: 28.6439
Created: 26-Jun-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2LVX_A         6 GMET-KREIGGYTYKVVF----YENVFQDSI------------LLG-NF------------------------------- 36  Schizosaccharom...
Q99PW7        34 GVCWlQQGKE----ATCS----LVLKTQVSReecc-----asgNINtAWsnf---------------------------- 72  Norway rat
Q16PW6        29 GTCW-LRRIE--STGKCN----KLFTRNVSRencc----nagtGLGysdr------------------------------ 67  yellow fever mo...
Q86NV3       212 GTCW-QTHLGs---GKCG----QVFSTDISRsecc----gssqSFSytdr------------------------------ 249 fruit fly
Q20CF4        30 GNCW-LQQSK---NGRCR------ELLKMNVsqqec---crsgRLGsaytg----------------------------- 67  sea lamprey
Q6CK66       502 DFCV-DSELNSYIYRLCYsndkGGDIVQIENkpdg-----nkvVIG-RYrgftidtnskydvylqslkyrypnt--evgn 572 Kluyveromyces l...
Q74ZM0       505 DFCI-SSKFDEYTYHICF----NPDTGRILQvqdrd---rsvvLVG-HFkdfklvsqrardayinqlqtratd---vdli 572 Eremothecium go...
AJV02854     537 SYCL-DDILDNYVYTICF----QRPMTEGVIyqaedkvdgkkvLIG-RFktsgfnvdlnmekyaehlkatydeksdlisn 610 Saccharomyces c...
AAR99335      33 GNCW-LQQGK---NGRCQ----VLYMPGMSReecc-----rsgRLGtSWtee---------------------------- 71  goldfish
XP_001421194  44 GLCF-DQKIEKYVYKACP----FGEAKQDNT------------QLG-RNsegv--------------------------- 78  Ostreococcus lu...
2LVX_A        37 --------------------ASQEGNVLKYENGQS-C 52  Schizosaccharomyces pombe 972h-
Q99PW7        73 ------------------thPGNKISLLGFLGLVH-C 90  Norway rat
Q16PW6        68 -----------------ditDVQLFFVNAFNDGMD-C 86  yellow fever mosquito
Q86NV3       250 -----------------elsSVEYFFATAIGGGVE-C 268 fruit fly
Q20CF4        68 ----------------eqvsTATLFRWMAFSGGAPnC 88  sea lamprey
Q6CK66       573 hlssdtveigkeeillgnlpDLNNGLILEYRGGTK-C 608 Kluyveromyces lactis
Q74ZM0       573 ghlsnyspgaghdlllgnlpDIHNGLLLSYGNGHK-C 608 Eremothecium gossypii
AJV02854     611 laaiqdddgnmqhyvfgnlnELNNGLVLEYENGDQ-C 646 Saccharomyces cerevisiae YJM1399
AAR99335      72 -----------------dvpNSTLFRWMIFNGGAPnC 91  goldfish
XP_001421194  79 -----------------ridADGKTMTLKFADGDA-C 97  Ostreococcus lucimarinus CCE9901
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