Conserved Protein Domain Family
zf-GRF
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pfam06839: zf-GRF (this model, PSSM-Id:284302 is obsolete and has been replaced by 462017)
GRF zinc finger
This presumed zinc binding domain is found in a variety of DNA-binding proteins. It seems likely that this domain is involved in nucleic acid binding. It is named GRF after three conserved residues in the centre of the alignment of the domain. This zinc finger may be related to pfam01396.
Links
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Statistics
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PSSM-Id: 284302
Aligned: 12 rows
Threshold Bit Score: 56.2707
Created: 20-Mar-2019
Updated: 18-Jul-2019
Structure
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Aligned Rows:
Download Cn3D
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Q5BKS4  592 PLCK-CG-RRSKRLIVSnNGPNHGKAFYCCPVGKYqqdrkCCGYFKWEQTL 640  house mouse
Q9M1L9  163 HQCP-CGaGLCRVLTAK-TGENVGRQFYRCPVFEG-----SCGFFKWCNDN 206  thale cress
Q9FFY2   37 IQCP-CGgGFCEIKVAN-TRENPGRKFYKCPTAQN------CCFFKWCDKV 79   thale cress
Q9M1L9   94 KSCP-CGvGICLILTSN-TPKNPGRKFYKCPNREEn---gGCGFFQWCDAV 139  thale cress
Q9NG98 1150 VMCN-CG-QLASQLTVRkDGPNQGRPFYACPTREKs-----CGFFKWGDED 1193 fruit fly
Q9NG98 1033 VLCTgCQ-QPARQNTVRkNGPNLGRLYYKCPKPDE------CNFFQWADEP 1076 fruit fly
Q13472  811 VTCN-CG-QEAVLLTVRkEGPNRGRQFFKCNGGS-------CNFFLWADSP 852  human
O70157  813 VTCN-CG-REAVLLTVRkQGPNQGRHFYKCSNGD-------CNFFLWADSS 854  house mouse
Q8TAT5  552 PFCN-HG-KRSTMKTVLkIGPNNGKNFFVCPLGKEk----QCNFFQWAENG 596  human
Q8BKW4   37 PLCP-HGpTLLFVKVN--QGKEETRKFYACSACRDr---kDCNFFQWEDEK 81   house mouse
Q8K203  506 PLCKmHH-RRCVLRVVRkDGENKGRQFYACSLPRg----aQCGFFEWADLS 551  house mouse
O70157  897 TPCL-CG-QPAVTRTVQkDGPNKGRQFHTCAKPRe----qQCGFFQWVDEN 941  house mouse
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