Conserved Protein Domain Family
Yip1

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pfam04893: Yip1 (this model, PSSM-Id:282716 is obsolete and has been replaced by 461468)
Yip1 domain
The Yip1 integral membrane domain contains four transmembrane alpha helices. The domain is characterized by the motifs DLYGP and GY. The Yip1 protein is a golgi protein involved in vesicular transport that interacts with GTPases.
Statistics
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PSSM-Id: 282716
Aligned: 208 rows
Threshold Bit Score: 27.7877
Created: 25-Jun-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q6MMR9    29 YLRHPVEKIKTLPDWNW-------------------------PLLIMTLVALSILSGVLTG---LVPPNFFRIMGGiivS 80  Bdellovibrio bacter...
Q6C1L1    59 LGRDVRGVGNRLKEVVWpgslsgfinpi----dnssqlikewDMWGPLVFCLILALSLGWG--------NSEAFSGvfaI 126 Yarrowia lipolytica
Q9P6P8    65 LFNEFRAIGEKLVYVLYpknaq---------------vlrdwDLWGPLIFSLVIALALALS---TDKIERESVFTVvvaL 126 Schizosaccharomyces...
Q86MW5    25 LLRDAKAIGRKLVVVVCpslggd-------------kelrdwDLWGPLFLCLILASILTIN---ASDDQGAAVFSAvfiF 88  Leishmania major
O02335    66 VKRDVLTVGAKFTHVVLphgdkq-------------qllrdwDLWGPLFICVGLALLLQHN----GGTESAPQFTQvftI 128 Caenorhabditis elegans
Q8BR70    62 IMRDLKAVGRKFMHVLYprksna--------------llrdwDLWGPLILCVTLALMLQKSsidGKNDGGGPEFAEvfvI 127 house mouse
Q86FB7    42 ILRSARAVGQKFAYVLIprrghg--------------llkewDLWGPLVLCLIMSALLHSSpnsESSGHGGPEFAQvfvI 107 Schistosoma japonicum
Q9VQZ0    51 VLRDIRAVGIKFYHVLYpkekss--------------llrdwDLWGPLVLCTFMATILQGSstaDSMSDNGPEFAQvfvI 116 fruit fly
Q6CK95    37 FKRDFHEINDKLKKVVYphfplgspsa------qdqhvfqgtDLWAPLCFIILYSLFLSKG---------RGRFSSffiT 101 Kluyveromyces lactis
AJS23148  52 LKRDVVEINSRLKQVVYphfpsffspsddgigaadndisancDLWAPLAFIILYSLFVSHA---------RSLFSSlfvS 122 Saccharomyces cerev...
Q6MMR9    81 PMvaaVTTFIGSLFIYYyfqvfekRTCSLRKIFTLVLFANIPFFIFQVGSELL----------------------PPITL 138 Bdellovibrio bacter...
Q6C1L1   127 TW---MGQILVTLNIKLl-----gGNISFFRGLCIVGYSLFPVVLGSVVEIFIpwi----------------wlsVPVIV 182 Yarrowia lipolytica
Q9P6P8   127 IW---FGEAVCSLNIKLl-----gANISIFQSMCILGYSSFPLMIASIVCAFVpli----------------firIPVIV 182 Schizosaccharomyces...
Q86MW5    89 VW---LGGLVVTVNAKLl-----gSKIMFFQTYCAMGYCLAPICLGALLCCVLpwf----------------llnLMLCF 144 Leishmania major
O02335   129 TF---FGSVIVTANIKLl-----gGNISFFQSLCVIGYCLLPPFVAAVLCSLFlhgia-------------fplrLLITS 187 Caenorhabditis elegans
Q8BR70   128 IW---FGAVTITLNSKLl-----gGNISFFQSLCVLGYCILPLNIAMLICRLLllagqgp---------infmirLFVVL 190 house mouse
Q86FB7   108 FW---LGSAIVTINSKLl-----gGAVSFLQTVCVLGYCILPLVIGLVICRLLlfassns--------vfvfiirLLIVI 171 Schistosoma japonicum
Q9VQZ0   117 VW---IGAAVVTLNSKLl-----gGNISFFQSVCVLGYCLTPVAISLIVCRVIllatqtr---------llfflrFVTTT 179 fruit fly
Q6CK95   102 CW---LVISAMATHLKLln---phEPMSWMSYLSLAGYCMFPQVINSLACSIIlplfnkipkv--tlirliviarIVSFA 173 Kluyveromyces lactis
AJS23148 123 SW---FILLVMALHLRLtk---phQRVSLISYISISGYCLFPQVLNALVSQILlplayhigkqnrwivrvlslvkLVVMA 196 Saccharomyces cerev...
Q6MMR9   139 LGFAFtaLLMAVGLTENFQMEkrralrlvtilfaiVFIIWLW 180 Bdellovibrio bacteriovorus
Q6C1L1   183 LNVAWalWSANNSLKHSGVLP--------------GRTVLAA 210 Yarrowia lipolytica
Q9P6P8   183 AMYAWtlFAAMGVLQNSNL----------------SNKKLLA 208 Schizosaccharomyces pombe 972h-
Q86MW5   145 MAWAWacWAALRFFRHTVS----------------ADREVLV 170 Leishmania major
O02335   188 IGFVWstYASMGFLAGCQP----------------DKKRLLV 213 Caenorhabditis elegans
Q8BR70   191 LMFAWsvVASTAFLADSQP----------------PNRKALA 216 house mouse
Q86FB7   172 TGLVYssYASFIFVYPTLP----------------KNRVVLS 197 Schistosoma japonicum
Q9VQZ0   180 IGFAWatYASFVFLGQSQP----------------PHRKPLA 205 fruit fly
Q6CK95   174 LCSSWsiISMWKVSKSQTL----------------VQKYPLA 199 Kluyveromyces lactis
AJS23148 197 LCLMWsvAAVSWVT---------------------KSKTIIE 217 Saccharomyces cerevisiae YJM1342
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