4E61,3TQ7


Conserved Protein Domain Family
EB1

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pfam03271: EB1 (this model, PSSM-Id:281288 is obsolete and has been replaced by 460870)
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EB1-like C-terminal motif
This motif is found at the C-terminus of proteins that are related to the EB1 protein. The EB1 proteins contain an N-terminal CH domain pfam00307. The human EB1 protein was originally discovered as a protein interacting with the C-terminus of the APC protein. This interaction is often disrupted in colon cancer, due to deletions affecting the APC C-terminus. Several EB1 orthologues are also included in this family. The interaction between EB1 and APC has been shown to have a potent synergistic effect on microtubule polymerization. Neither of EB1 or APC alone has this effect. It is thought that EB1 targets APC to the + ends of microtubules, where APC promotes microtubule polymerization. This process is regulated by APC phosphorylation by Cdc2, which disrupts APC-EB1 binding. Human EB1 protein can functionally substitute for the yeast EB1 homologue Mal3. In addition, Mal3 can substitute for human EB1 in promoting microtubule polymerization with APC.
Statistics
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PSSM-Id: 281288
Aligned: 165 rows
Threshold Bit Score: 36.7206
Created: 12-Jul-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4E61_A        38 EIEREFYFNKLRDIEILV---HTtqdlinegvykfndetitghgnGNGGALLRFV--KKVESILYA 98  baker's yeast
A0E6G5       192 KCERDFYYVKLKDLDGLMdq-----------------------hlQQALTADQLC--KGIKEILYN 232 Paramecium tetraurelia
A0BWJ6       190 KQEREFYFLKFKELDNFIe-------------------------gASQLTQEQMQ--RGIKDILYc 228 Paramecium tetraurelia
A0BDM4       191 KQEKDYYFQKFKDLDFFIe-------------------------gASQLTQEQMY--KGIKDILYS 229 Paramecium tetraurelia
XP_001528280 373 QTERNFYFNKLRDIELLIqniQAdp------------------siVEKLDVLTLT--AQVEKLLYK 418 Lodderomyces elongisporus NRR...
XP_007372658 233 QIERNFYFNKLQDIEMIVqhileak-------------ehgksyeFADLDIFKLS--NKIQTILYA 283 Spathaspora passalidarum NRRL...
XP_001022408 241 KDERNFYFSKIQSIDQMLdni----------------------sdKNPMTINDIK--KYIKTILYS 282 Tetrahymena thermophila SB210
XP_001022872 301 QEEREFYFSKLKNIDHLLely---------------------eelNLGDEVDELV--FKIKDILYS 343 Tetrahymena thermophila SB210
CCE43260     385 QVERNFYFNKCRDIEILIqnie--------------------hneTLMSELDVLTllKKIEDTLYA 430 Candida parapsilosis
XP_003676632 206 ERERSFYFGKLRDIEILV---QTtqdlik-----------egvykMENDKFEKFL--SKVQKILYA 255 Naumovozyma castellii CBS 4309
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