2CR7,1E91,2L9S,2LD7


Conserved Protein Domain Family
PAH
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pfam02671: PAH (this model, PSSM-Id:280780 is obsolete and has been replaced by 460645)
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Paired amphipathic helix repeat
This family contains the paired amphipathic helix repeat. The family contains the yeast SIN3 gene (also known as SDI1) that is a negative regulator of the yeast HO gene. This repeat may be distantly related to the helix-loop-helix motif, which mediate protein-protein interactions.
Links
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Statistics
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PSSM-Id: 280780
Aligned: 405 rows
Threshold Bit Score: 31.2164
Created: 22-Jun-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
2CR7_A         29 ATYNGFLEIMKEFKSQ--SiD--------TPG------VIRRVSQLFHEHPDLIVGFN-AFL 73   house mouse
XP_005843241   41 QVYRRFLDAMQRYGGG--AlD--------VAA------LRAAVQALFAGHPALLKDFD-AFV 85   Chlorella variabilis
EMS54833       32 DVTAEFLDLFARFS---------------RREivdipaVVARAYALLQGHPDLIQ----RFD 74   Triticum urartu
XP_783309    1826 DQYRNFLRVFNEYSEDpnSs---------IAN------LYYAVKYVLSERPDLIEEFT-AFM 1871 purple sea urchin
XP_002609767 1228 DRYQKVLRVFASYMRE--GaS--------LEG------LRQEITPLLQGQPYLLQEFT-RFF 1272 Florida lancelet
XP_006673086   38 ETYQSFLASFQEYQKA--LaSpdaskdkhLAA------LRTKVVSLLQDHPDLSKEFE-QYF 90   Cordyceps militaris CM01
EMT29796       64 DHYAAFLKIMQDYFRDr-TmT--------PRK------VYKKVRRCMRDCPELLEEFVdNFL 110  Aegilops tauschii
EMS50858      133 DDYAAFLQTMQDFCRDr-TmT--------PQE------VYSNVERCMRNCPELLEEFIdNFL 179  Triticum urartu
XP_006654860  116 eDYHAVLDIMVNFNKIdtV-V--------TED------IIDEVKRIVGNHPKILEEFN-FFL 161  malo sina
NP_001056476  117 edFHALLNVLAKYYKNeiK-T--------SEE------VLEKVERIIGNYPEFLEEFK-IFV 162  Japanese rice
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