1UX6


Conserved Protein Domain Family
TSP_3
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pfam02412: TSP_3 (this model, PSSM-Id:280556 is obsolete and has been replaced by 367074)
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Thrombospondin type 3 repeat
The thrombospondin repeat is a short aspartate rich repeat which binds to calcium ions. The repeat was initially identified in thrombospondin proteins that contained 7 of these repeats. The repeat lacks defined secondary structure.
Links
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Statistics
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PSSM-Id: 280556
Aligned: 12 rows
Threshold Bit Score: 28.0798
Created: 10-Jul-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
1UX6_A         26 DSDSDRIGDTC----DNnqDIDEDGHQNNLDNCPYVPNANQ 62   human
Q5M980        462 DSDSDLIGDKCd--nNQ--DIDEDGHQNNLDNCPYIPNANQ 498  African clawed frog
AGG16133      880 DTDLDGIGDAC----QG--DQDNDGVPDVNDTCPFNPKIHK 914  starlet sea anemone
XP_001851410  266 DGDGNGVGDAC----EK--DVDNDGVDNLLDNCANVANPGQ 300  southern house mosquito
NP_775332     694 DSDSNGVGDVC----EN--DFDNDSVMDLVDVCPESAEVTl 728  zebrafish
XP_001861362  544 DANNDGVGDIC----EE--DFDLDLIPNYLDNCPNNSKIFS 578  southern house mosquito
XP_001866777  486 DRDRDGRGDAC----DK--DFDGDLVEDSMDNCPRNGQIMR 520  southern house mosquito
XP_001866775  388 DSDGDEVGDACt--tNL--DTDMDGRQDDQDNCPYTANTAQ 424  southern house mosquito
NP_001087096  553 DTDNDGKGDAC----DD--DMDGDGIKNILDNCQRVPNVDQ 587  African clawed frog
XP_001639928  276 DNDSDTEGDAC----DA--DDDNDLIPDKQDNCQFKSNPDQ 310  starlet sea anemone
ACY18534      191 DADADQIGDVCadfsDN--DYDGDGVGNDADNCPTTANEDQ 229  Haliangium ochraceum DSM 14365
Q6YID6        122 DADGDGIGDAC----DT--DADGDGLLDTSDNCPLIANPGQ 156  black tiger shrimp
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