1X2L,1WIZ,2D5V,1WH8,1WH6,2CSF


Conserved Protein Domain Family
CUT
?
pfam02376: CUT (this model, PSSM-Id:280527 is obsolete and has been replaced by 460543)
Click on image for an interactive view with Cn3D
CUT domain
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein.
Links
?
Statistics
?
PSSM-Id: 280527
Aligned: 44 rows
Threshold Bit Score: 83.0255
Created: 10-Jul-2015
Updated: 5-Aug-2015
Structure
?
Program:
Drawing:
Aligned Rows:
Download Cn3D
PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
1X2L_A         13 EEEQLDTAEIAFQVKEQLLKHNIGQRVFGHYVLGL---SQGSVSEILARPKPWRKLTVkgkepfikMKQFLSDEQNVLAL 89   human
Q9BL02        596 NGHPLNTTEIASHCKRLMIAYNIGQRLFAKHVMNQvvkSQGSLSELLSKPRHWNKLTDkgreafrrIYGWISDDEAINLL 675  Caenorhabditi...
Q9BL02        837 AYTVLDTDFLVKQIKEFLTMNSISQRQFGEYILGL---SQGSVSDLLARPKTWAQLTQkgrepfirMQLFMDDVEASEEN 913  Caenorhabditi...
XP_005171778  408 qnLELDTFSITQRVKKTLIVHNIGQRVFGEEVLGL---TQSSVSELLSHPKPWTKLSLkgkenfirMHLWLRDPHSVQKL 484  zebrafish
EFZ15985      559 lTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGL---SQGSVSELLSKPKPWHMLSIkgrepfirMQLWLSDAHNVDRL 635  red fire ant
XP_009051593   10 MTSEIDTLDLTSRVKDVLQFHNLGQKLFGEAVLGL---SQGSVSELLSKPKPWHMLSIkgrepfikMHLWLSDPQNIDRL 86   owl limpet
EZA58840      847 MYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGL---SQGSVSDLLARPKPWHMLTQkgrepfirMKMFLEDDNAVHKL 923  Cerapachys biroi
XP_003377815  308 RFGRINTEKLVQRVKEHLLQYSISQRVFGEQVLGL---SQGSVSDLLARPKAWHMLTQkgrepfirMHAFLEDNELLKKL 384  Trichinella s...
XP_002641550 1018 geEILDSQKIVSRVKEVLEEHGISPRVFGDEYLNC---SPTMCADLMIRTKPFQLSRPtekvmyfrMRNFLNDPSSIPNL 1094 Caenorhabditi...
1WH8_A         23 MSPELDTYSITKRVKEVLTDNNLGQRLFGESILGL---TQGSVSDLLSRPKPWHKLSLkgrepfvrMQLWLNDPHNVEKL 99   human

1X2L_A         90 R 90   human
Q9BL02        676 C 676  Caenorhabditis elegans
Q9BL02        914 D 914  Caenorhabditis elegans
XP_005171778  485 N 485  zebrafish
EFZ15985      636 Q 636  red fire ant
XP_009051593   87 K 87   owl limpet
EZA58840      924 V 924  Cerapachys biroi
XP_003377815  385 I 385  Trichinella spiralis
XP_002641550 1095 I 1095 Caenorhabditis briggsae
1WH8_A        100 r 100  human
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap