Conserved Protein Domain Family
VPS9

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pfam02204: VPS9 (this model, PSSM-Id:280383 is obsolete and has been replaced by 460489)
Vacuolar sorting protein 9 (VPS9) domain
This domain acts as a GDP-GTP exchange factor (GEF). It activates Rab GTPases by stimulating the release of GDP and allowing GTP to bind.
Statistics
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PSSM-Id: 280383
Aligned: 46 rows
Threshold Bit Score: 73.7885
Created: 22-Jun-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q4P1U7        773 VQQCGDELQRLESAmcRSPQAKLDVLVRAHKIAVEGVaqlpsikmrdddtavegqekeqtarpssgkkgDGSTSADLILP 852  Ustilago maydis
Q22BJ9        878 YYKAIKKLQNLTFY--NSPVHKMKLLVQCFELIPQCVsefyek--------------------nidyleQNLIASDDLIN 935  Tetrahymena t...
Q24BB5        653 YYKCFKYILKIKKQ--QSPIGKMKMIVKASENILVCInnfykm--------------------ygiqqnN-FLDADDVLS 709  Tetrahymena t...
Q24CA2        842 fDLCINALKQVLVE--KKPIGKLRLILKVFDNIQRCIhkfyhk---------------------nnsneKVQIGPEDLMD 898  Tetrahymena t...
Q2HFI4        381 LGRAVEEFRKMPHA--SCPQEMMEILLATTKAATQLSdapqpgqa----------------lgsatekpPMTINADTLVS 442  Chaetomium gl...
Q6BJ87        366 IYKAIDEFSKLSDAsiLNSSGKTQILKNTVNILTNNVkqiseies----------------mtektgsdGITVNADILIG 429  Debaryomyces ...
Q75CA6        312 VVQATECFSKLTLT--NSHHEKARILISTFQKLTTKTsqa---------------------------tlDPMIDADTLLG 362  Eremothecium ...
Q80UW3        410 RNRIHARLAHLHAA--CAPRRKVALLLAVCSDVYAGLggg---------------------------enKEPLGADAFLP 460  house mouse
Q8IHX3        268 IKVISFHIKQIEKY--RDPINKIHILDNISKIICEVVsaennnl-------------------keqniaIYDINSDTLIS 326  Plasmodium fa...
XP_002076945   12 LRLIANLLWRLQEA--ELPLDKLELFLCVISTVFDATgc----------------------------prGQQLGADDFLP 61   Drosophila si...
Q4P1U7        853 ILIYSIVSSNPS-HLASNLLYIQRF--R-AESLVQGETSYCLVNVQAAVAFLENVDV 905  Ustilago maydis
Q22BJ9        936 ILVFIVLKSKCT-QINSHLKLISSF--L-SKSTQQSKIGYYCTTLQIVCGYLESDKI 988  Tetrahymena thermophila SB210
Q24BB5        710 IFSYFTCKCFQH-EMNTHIKLISKF--I-TSNLLNSISGYYLTTLSASLQNILEFRN 762  Tetrahymena thermophila SB210
Q24CA2        899 ITVYILAKSQQY-QIIHDINIVRSF--ItKNTEYSDKAGYYLQTLEAAFQYIIETEf 952  Tetrahymena thermophila SB210
Q2HFI4        443 LLLYVVIKAQIK-HLQARLAYIQNF--VfIDDVESGEMGYALSTCEAVLSYLDRDSG 496  Chaetomium globosum CBS 148.51
Q6BJ87        430 LLIMVIVHARVD-NLEAHLYYIKHF--NsVDYTNDGYFCYILSNFDAVIYHLSSSMN 483  Debaryomyces hansenii CBS767
Q75CA6        363 LMVVVVCRAQVK-NLKSHLDYLREFa-QnSDDVKFGLLGYSLSTLEAVVGYFDIGGS 417  Eremothecium gossypii
Q80UW3        461 ALTEELIWSPHIgETQLDVEFLMEL--L-DPGELRGEAGYYLTTWFGALYHIAHYQP 514  house mouse
Q8IHX3        327 VLVAAISFGEIQ-NLISHSLHLHMYidNlSTSEKIDKLSYIFTIFHSAIMYLCDVKN 382  Plasmodium falciparum 3D7
XP_002076945   62 VLVYVVAKCGFV-GAEIEAEFMWGL--L-QPTLLNGEPGYYLTALCSAVQVLKTFMa 114  Drosophila simulans
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