2KI7,1OQK,1TSF


Conserved Protein Domain Family
UPF0086

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pfam01868: UPF0086 (this model, PSSM-Id:280109 is obsolete and has been replaced by 460367)
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Domain of unknown function UPF0086
This family consists of several archaeal and eukaryotic proteins. The archaeal proteins are found to be expressed within ribosomal operons and several of the sequences are described as ribonuclease P protein subunit p29 proteins.
Statistics
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PSSM-Id: 280109
Aligned: 229 rows
Threshold Bit Score: 66.2568
Created: 22-Jun-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2KI7_A         41 KNIVWHELIGLKVRVVNSTHPGYVGIEGYVIDETRNMLVIAg--EN-----K----VWKVPKDVCIFEFETwdgtkIK-I 108  Pyrococcus fu...
1TSF_A          8 VELIARDWIGLMVEVVESPNHSEVGIKGEVVDETQNTLKIMt--EK-----G----LKVVAKRGRTFRVWYkg-kiMR-I 74   Archaeoglobus...
WP_012940738    4 efVIAHEWIGLEVEVVRSPNPCEVGIRGKVVDETKNTLKISt-eK------G----LKTVIKRGRTFRVKFag-kvLD-V 70   Archaeoglobus...
WP_013683652    4 alILADEWIGLKVEVVESPNPSEVGLKGIVVDETMNTLRIKt-eKS----------LKTVAKRGRVFRVWYkg-rvLR-V 70   Archaeoglobus...
WP_015589755    3 elIIAHELIGLECEVVDSPNRYEVGLAGEIVDETMKTLLIRt--DR-----G----YKRIAKADRKFKLRVgd-scVE-L 69   Archaeoglobus...
WP_021790157    3 yNIYGEEYLGRKITVLNSKNRQLLGVTGIVVKETKNMFSIEt-sD------M----VRQIPKDSCDFNVNVeg-tnYL-I 69   Thermoplasmat...
CDS28137      123 ENVLRMDLIGAYMQVLRSITTKQVDLEGTVTMETRNVFYFAt-eGD-----GntsqLKLVPKRGTIFKLIMpg-aeVA-L 194  Hymenolepis m...
CDI98904      123 ENVLRMDLIGARMRVLRSISTKQVDLEGVVTMETRNIFYLAt-eDDsstaaQ----LHIVPKRGTVLLLLMpg-aeVA-L 195  Echinococcus ...
WP_009887172    4 nevylMEFIGKNITVKNSHNIKNVGIKGKLIDETKNMMYIWn--GS-----K----ICSIQKSGTIFGIEFnegahYD-I 71   Ferroplasma a...
WP_015019207    5 ENVLVHEIIGLDAKIVESTDPTLEGVSGSIVFETKNMISIRsdlDS-----S----VKQIAKRAAK-KIEIkthfgVCfI 74   Candidatus Ni...
2KI7_A        109 SGEKLVGRPEMRLKK 123  Pyrococcus furiosus DSM 3638
1TSF_A         75 KGDLINFRPEDRIKR 89   Archaeoglobus fulgidus
WP_012940738   71 SGDLINFRPEERIKR 85   Archaeoglobus profundus
WP_013683652   71 KGDLIAFRPEERIKR 85   Archaeoglobus veneficus
WP_015589755   70 DGNLIAYRPEERIKR 84   Archaeoglobus sulfaticallidus
WP_021790157   70 KGNLIRYRPENRLKe 84   Thermoplasmatales archaeon Gpl
CDS28137      195 NGNSLAHRPIDRTLR 209  Hymenolepis microstoma
CDI98904      196 NGSSLAYRPIDRTLR 210  Echinococcus multilocularis
WP_009887172   72 NGDAILIKPEDRTKe 86   Ferroplasma acidarmanus
WP_015019207   75 SGSSLIGRPEDRISR 89   Candidatus Nitrososphaera gargensis
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