4DGW,2DT6,2E60,1UG0


Conserved Protein Domain Family
Surp

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pfam01805: Surp (this model, PSSM-Id:280053 is obsolete and has been replaced by 460339)
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Surp module
This domain is also known as the SWAP domain. SWAP stands for Suppressor-of-White-APricot. It has been suggested that these domains may be RNA binding.
Statistics
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PSSM-Id: 280053
Aligned: 368 rows
Threshold Bit Score: 38.6334
Created: 11-Jul-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4DGW_B         9 EVIKLTARYYAKDK-SIVEQXISK-DGEARLNFXnSS-HPLHKTFTDFVAQY 57   Saccharomyces cerevisiae S288c
CCD79155     183 HIIEKTAVFVSRQGsQMEIVLKAKqNKNPLFGFL-TYdHPLNPFYKEIVRli 233  Schistosoma mansoni
CBY24220     166 EIILRTAKFLANQNnQMEILLKAKqSGTDKFDFL-NFgHTLNDYYKHLKKsi 216  Oikopleura dioica
XP_002605657 208 QIIERTATFISSQGtQMEIVLKAKqHGNSQFDFL-TFdHYLNPYYKHMVKMI 258  Florida lancelet
XP_007565837 199 NIIERTANFVCQQGaQFEIVLKAKqAGNSQFDFL-RFdHYLNPYYKHILRAM 249  Amazon molly
2E60_A        29 AIIERTASFVCRQGaQFEIMLKAKqARNSQFDFL-RFdHYLNPYYKFIQKAm 79   human
XP_009859984 226 AIIEKTAKFVSKQGaQMEIVLKAKqSSNSQFQFL-QFgHYLNPYYKHIVTRI 276  vase tunicate
XP_002401127 194 AIIEKTAVFVSQHGaQMEILVKTKqSSNPQFAFL-AFdHPLNVYYRFLVEQI 244  black-legged tick
XP_006847574 160 QIIARTALFVSERGgQSEIILRVKqGNNPTFGFL-MPnHNLHPYFRYLVDhp 210  Amborella trichopoda
XP_002866076 150 QIITRTSSFVSKHGgQSEIVLRVKqGGNPTFGFL-MPdHHLHPYFRFLVDhq 200  Arabidopsis lyrata subsp. lyrata
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