3ZQD,2MKX,1E0G


Conserved Protein Domain Family
LysM
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pfam01476: LysM (this model, PSSM-Id:279777 is obsolete and has been replaced by 396179)
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LysM domain
The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known.
Links
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Statistics
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PSSM-Id: 279777
Aligned: 158 rows
Threshold Bit Score: 32.7559
Created: 8-Jul-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
3ZQD_A         7 YQVKQGD--TLNSIAADF--------RISTAALLQANpSLQAG--LTAGQSIVIP 49  Bacillus subtilis subsp. subtilis str. 168
O86394       202 HTVRKGE--TVKQIAAAIrpkhltleQVA-DALLKANpNVSAHgrLRAGSVLHIP 253 Neisseria meningitidis
Q9W4G8        84 HSITAED--TMTRLALKY--------DTSIGRICRAN-RMHSQdvLQARRHVWVP 127 fruit fly
O02055        50 YQVQTDD--TLERIALKH--------NCSVSSLVRAN-KLWSPsaLFMKQFIRIP 93  Caenorhabditis elegans
Q9RS36        99 FRVRKGE--DLKKLAQRL--------GVSEGDIRRDNpQIDRRgsLNAGQVLRLP 143 Deinococcus radiodurans
CFS14880       2 VRVETGE--SLYDVAVRVapna-ptrQVA-DRIRELN-GLQTPa-LAVGQTLIAP 50  Mycobacterium tuberculosis
WP_010908067 114 VRVEAGE--SLQDVAARVapda-pvrQVS-ERIRELN-VLDSSm-LVAGQTLIAP 162 Mycobacterium leprae
WP_010873243  87 HQVKEGE--SLWQISQAF--------QVDAKAIALAN-SISTDteLQAGQVLNIP 130 Synechocystis sp. PCC 6803
EWC99531      45 FHVVENDggSLEAIAKKY--------NVGFLALLQANpGVDPYv-PRAGSVLTIP 90  Klebsiella pneumoniae NB60
WP_045166906 266 HTVRSNE--SLYDISQQY--------GVRLKNIMKANrKIVKRg-IKAGDRVVLP 309 Prevotella intermedia
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