1IVZ


Conserved Protein Domain Family
SEA
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pfam01390: SEA (this model, PSSM-Id:279699 is obsolete and has been replaced by 460188)
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SEA domain
Domain found in Sea urchin sperm protein, Enterokinase, Agrin (SEA). Proposed function of regulating or binding carbohydrate side chains. Recently a proteolytic activity has been shown for a SEA domain.
Links
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Statistics
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PSSM-Id: 279699
Aligned: 219 rows
Threshold Bit Score: 36.3817
Created: 20-Jun-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
1IVZ_A        12 QHFNLNFTITNLPYSQDIAQPSTTKYQQTKRSIENALNQLFRNSS-IKSYFSDCQVL-------AFRsvsnnNNht---- 79   house mouse
EGW03420     346 FYFVGMFCITNIEFLPEYQQKESREFLSMAKTVQQVVRP--------DRQYGSRRVEpagagvgSNN-----KGgl---- 408  Chinese hamster
XP_012403671 312 aIFFLSFVISNLPFNSSLENPSSFYYQELKNSISGLLRQIYKD-----KAFVTFHLL-------QFR-----KGsv---- 370  Tasmanian devil
CAG12530      45 QQYVVYLSILNRNFSADLSSHTSPTFKREARGVQSTVEKVMRSSS-LSRYFNYTTVF-------AFG-----EGsv---- 107  spotted green ...
XP_007482087   1 -MFFLSFRILSKNFNSSLENPSSLYYQELKNSLSDLLQQIYKNKA-FMTFY----LL-------QFR-----MGsv---- 58   gray short-tai...
EGT43132      74 QSYSGSFTIPQQ-ASEIFDTKNTNTYFSIFNLIQNALDQIFVTSS--------------------LRpy-aaQAiltdlq 131  Caenorhabditis...
XP_005981806  60 KIFNGYLSVRNENFLDAYENSNSTEFANLAKKVKEALKFLYSGIPvLGPYYKTSTVT-------AFS-----EGsv---- 123  chiru
XP_005330785  88 KVFNGYLRITNENFVDAYENSNSTEFKSLASKVKEALKLLYSEVPiLGPYHKKSVVT-------AFS-----EGsv---- 151  thirteen-lined...
CAF90245     133 LYHNGTFRLPNQDFTKDLINMSSTQSQVLAASLQEKIAGFYTSSPaLGRYFSEASIS-------AFR-----DGendqsp 200  spotted green ...
XP_004913947  77 KLYSCSLNIVSHELTYDLTRPESSSFRTEAAHLQKLVNGLVLASE-LAAYHNSCTVY-------AFG-----EGsl---- 139  western clawed...

1IVZ_A        80 --gvDSLCNF--S-----PLARRVDRVAIYEEFLRMTH 108  house mouse
EGW03420     409 --lvHFWIVFvmP-----HAKGHIFCEECVAAILKDSI 439  Chinese hamster
XP_012403671 371 --itDCTVVFqaG-----S-ITTSQVQKLFAENVKKSN 400  Tasmanian devil
CAG12530     108 --vaHLWLVMsvP-----SSHVGAITVEKLSKSLQKgl 138  spotted green pufferfish
XP_007482087  59 --vtDCILVFqeG-----S-ITASEVQNLFAENLKKGY 88   gray short-tailed opossum
EGT43132     132 nrgnDLTVLFrvN-----MFGGGNVDQNTIAGIIRSNL 164  Caenorhabditis brenneri
XP_005981806 124 --iaYYWSEFdiP----------KHLVKEAEQAMAEKR 149  chiru
XP_005330785 152 --iaYYWSEFsiP----------QHLEEETERIMAQEQ 177  thirteen-lined ground squirrel
CAF90245     201 sviaHYRLKFlmPeeeedQLRNFTLSREMVFNVFRQLL 238  spotted green pufferfish
XP_004913947 140 --kiYFWVSLevPnt-dlKYVTESSVTAALNSVLHKKT 174  western clawed frog
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