2GJ3,4BBU,2W0N


Conserved Protein Domain Family
PAS

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pfam00989: PAS (this model, PSSM-Id:279347 is obsolete and has been replaced by 395786)
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PAS fold
The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs. The PAS fold appears in archaea, eubacteria and eukarya.
Statistics
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PSSM-Id: 279347
Aligned: 49 rows
Threshold Bit Score: 48.1691
Created: 11-Jul-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2GJ3_B      5 EIFRQTVEH---APIAISITD-LKANILYANRAFRTITGYGS-EEVLGKNESILSNGTTPR----LVYQALWGRLAQKKP 75   Azotobacter vinel...
P23222     16 EHFRVRIEG---FGVGTWDLD-LKTWALDWSDTARTLLGIGQ-DQPASYDLFLSRLEPDD------RERVESAIKRVSER 84   Bradyrhizobium di...
P42497    789 GDYKAIIHSpnpLIPPIFAAD-ENTCCLEWNTAMEKLTGWPR-SEVIGKLLVREVFGSyc---rlKGPDALTKFMIVLHN 863  thale cress
P42496    739 GDYKAIVQSlnpLIPPIFGAD-EYGFCSEWNAAMEKLSNWRR-EEVLGKMLVGEIFGLQMVccrlQGQDVVTKLMIVLND 816  Adiantum capillus...
P06593    750 GDYKAIIHNpnpLIPPIFGAD-EFGWCSEWNAAMTKLTGWNR-DEVLDKMLLGEVFDSSNAscplKNRDAFVSLCVLINS 827  oat
P55141    754 GDYKAIVQNpnpLIPPIFGTD-EFGWCSEWNQAMTELSGWRR-EDVMNKMLLGEIFGIQTScchlKSKEAFVNLGVVLNN 831  parsley
AHM97015   24 AHLAHAQEL---SHTGSFSWN-ASTGEAFWSKETFRIFQIDL-QTTPAPQLVIERTHPDDRa---SVKEIIDEAMRDLRD 95   Bradyrhizobium sp...
BAL13353  297 AYLAEAQHL---THTGSWSWDvHTRDFVYRSAEVDRLFGFNP-QEPVSLETIRSRIHPEDLp---GLQEVQRQAIDQEHE 369  Bradyrhizobium ja...
AAA23052  320 RRFRLAVEA---ARCGIWEWD-LNGDQVYLSDVTGAMFGWGGgGVVSGQDLLERISID--------HRERVRQALANAAM 387  Caulobacter cresc...
ABG21347  736 GDYARIMWSpstLIPPIFITN-ENGVCSEWNNAMQKLSGIKR-EEVVNKILLGEVFTTDDYgcclKDHDTLTKLRIGFNA 813  thale cress
2GJ3_B     76 WSGVLVNRRK--------DKTLYLAELTVAPVLNEAGETi-YYLGMHRDT 116  Azotobacter vinelandii
P23222     85 GGGFDVSFRVag-----tSNAGQWIRARAGLIRDEAGTAr-HLSGIFLDI 128  Bradyrhizobium diazoefficiens USDA 110
P42497    864 AIGGQDTDKFpfpf-fdrKGEFIQALLTLNKRVSIDGKIi-GAFCFLQIP 911  thale cress
P42496    817 AVNGQESEKFplvf-ydrNGRRVEALLIASKRTDADGRIt-GVFCFLHTA 864  Adiantum capillus-veneris
P06593    828 ALAGEETEKApfgf-fdrSGKYIECLLSANRKENEGGLIt-GVFCFIHVA 875  oat
P55141    832 ALTGQISEKIcfsf-fatDGKYVECLLCASKKLHGEGTVt-GIFCFLQLA 879  parsley
AHM97015   96 FEHEYRLLLP--------DGSVKHIHAQARVTRTASGEI--EFVGAATDI 135  Bradyrhizobium sp. CCBAU 051143
BAL13353  370 RFEYDFRVILp-------DGGIRRIHSVAHVVVGSDGNVs-ELIGTHMDV 411  Bradyrhizobium japonicum USDA 6
AAA23052  388 YGAFDVSFRVpas---eqGARSLWIDARGQGFGKPGSEGhaRIIGVALDV 434  Caulobacter crescentus CB15
ABG21347  814 VISGQKNIEKllfgfyhrDGSFIEALLSANKRTDIEGKVt-GVLCFLQVP 862  thale cress
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