Conserved Protein Domain Family
Pentapeptide
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pfam00805: Pentapeptide (this model, PSSM-Id:279183 is obsolete and has been replaced by 459943)
Pentapeptide repeats (8 copies)
These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.
Links
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Statistics
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PSSM-Id: 279183
Aligned: 95 rows
Threshold Bit Score: 29.2736
Created: 7-Jul-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Q52118        67 INLKGVNLSDTDLKGAYLSDANLSDADLSDANLSDANLSG 106 Pantoea stewartii subsp. stewartii
P81760       124 TNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKG 163 thale cress
BAM51790     142 AQLMGAHLHQAYAPEADFSAVAAIAVDLRWANLRKTNFRG 181 Bacillus subtilis BEST7613
WP_010873570 320 SSLALATLIGTDLREADLRGATLQNVNFSGAKVENLSFGD 359 Synechocystis sp. PCC 6803
WP_000112847  58 EDLSNSNFAGCRLQNAIFQDCNMYKTNFNFAIMEKILFDN 97  Escherichia coli
EKI47877     124 SKLFFTRLTNTFLEMVICTDSNMANVNFNNANLSNCHFNC 163 Escherichia coli N1
BAM54635      75 SLVDRVTLDFADLRDTIFTEAIATRTRFYDTDITGADFSD 114 Bacillus subtilis BEST7613
WP_010886324 519 SILKDANFSAAILTKTDFSKSILTGSIFKFAQIDQTCFSN 558 Rickettsia prowazekii
AGJ01788     475 SNLANMNLTNFNLSNLVFNGVDFSKSIFKKANLTNTVIKN 514 Rickettsia prowazekii str. NMRC Madrid E
WP_042036047  26 CRFRDCLFEETDLRKSDFTGSEFNNTEFRHSDLSHCDFSM 65  Escherichia coli
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