1V9X,2CS2,1UW0


Conserved Protein Domain Family
zf-PARP

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pfam00645: zf-PARP (this model, PSSM-Id:279039 is obsolete and has been replaced by 459887)
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Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
Poly(ADP-ribose) polymerase is an important regulatory component of the cellular response to DNA damage. The amino-terminal region of Poly(ADP-ribose) polymerase consists of two PARP-type zinc fingers. This region acts as a DNA nick sensor.
Statistics
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PSSM-Id: 279039
Aligned: 221 rows
Threshold Bit Score: 45.683
Created: 14-Jun-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1V9X_A         14 EYAKSSRSSCKTCKSVINKENF---------------RLG----KLV-QSthFDGIMPMWNHASCILkktkqi------- 66   thale cress
A0C2P8         10 EYALSNRIKCATCHTVIYKHDL---------------KIGhiflRKD-EG--QQFDKKVWYHVDCVKkwptge------k 65   Paramecium te...
A0CG89          8 gYALSNRARCTGCFQNIAKNEI---------------RFGh--vFVA-PG--FGYDKKHWYHLTCLKfipkgd------r 61   Paramecium te...
A0BHD5          8 gYALSNRVKCQNCLQNIIKDDI---------------RIGhv-lTRP-PG--LGFDRKVWYHLPCLTsikgdr------- 61   Paramecium te...
XP_001565567   34 qkAPTARARCRKCSQLISKGEM---------------RVGv--pIRHnAG--DNGWISAWQHLGC-Trmekses-----e 88   Leishmania br...
EMS59386      114 EVAQSARSSCRRCSVKIAKGTLtkykeiltfntsgrvRVS------------SKLDGQGWYHVSCFLemspt-------- 173  Triticum urartu
XP_001769461  110 ENAKSSRSTCKSCNEKIDKGQV---------------RIStmvaADG-GR--FRGKVPQWRHAKCFLsmghfs------- 164  Physcomitrell...
XP_004994319   89 EYAKSSRAACRKCEEKINKGEL---------------RLGvl-mDPP-AEasFRGKVPWWYHRRCFIgalsahkdialas 151  Salpingoeca r...
XP_001746811   68 EHAKSGRAACRACEEKIAKGDL---------------RFAvl-cEAE-PGsrYRGPVPRWYHKDCFIdglenhpdvplel 130  Monosiga brev...
XP_002501366   32 EIAKSGRARCRKCSELIAKDSV---------------RIGvp-iKWR-GG--LFGWISSWQHPACLRvpgvtr------d 86   Micromonas sp...
1V9X_A         67 ksvddVEGIESLRWEDQQKIRK 88   thale cress
A0C2P8         66 gqelpLFRLQSLKAEDQLRIKE 87   Paramecium tetraurelia
A0CG89         62 nqdvpLINIHCLKSEDQKKVHD 83   Paramecium tetraurelia
A0BHD5         62 nqdldVVNIHGLKEEDQKKVRQ 83   Paramecium tetraurelia
XP_001565567   89 nyestMHGFTELKPEEQEHVvn 110  Leishmania braziliensis MHOM/BR/75/M2904
EMS59386      174 asvekFPGWETLLHDDRAAIID 195  Triticum urartu
XP_001769461  165 gplasLPGWDTLTSEDQAQVQT 186  Physcomitrella patens
XP_004994319  152 lapeqFKNHKRISADDLADVRS 173  Salpingoeca rosetta
XP_001746811  131 ieakwLTNITLLEPDEVKDIDD 152  Monosiga brevicollis MX1
XP_002501366   87 elrceLHGVDALTDEQADEVLD 108  Micromonas sp. RCC299
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