3PIO,3FIN,3J3V


Conserved Protein Domain Family
Ribosomal_L23

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pfam00276: Ribosomal_L23 (this model, PSSM-Id:278694 is obsolete and has been replaced by 459743)
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Ribosomal protein L23
Statistics
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PSSM-Id: 278694
Aligned: 742 rows
Threshold Bit Score: 42.7828
Created: 12-Jun-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3PIO_Q         5 DILQ--------APVISEKAYSAMErg-vYSFWVSPKATKTEIKDAIQQAFGVRVIG--------ISTMNVPGKRKR-Vg 66  Deinococcus rad...
Q09727        14 NITFtlcrglnlQPKF-------------AVFRVPLHVNKFDVRDYLQHVYNLKVVS--------VKSRIYQGKLFRnql 72  Schizosaccharom...
CCJ30603     140 KVLV--------CPLNTESSMKKIEenntLVFRVHLRANKYQIQLALKKLYNVDVQKnrmslwmeINTLICPN------- 204 Pneumocystis ji...
CCJ30962      16 NIVFtllrnhrlLPTQ-------------AVFKVPITVNKFDVRDYLFHLYQVQVTR--------VRSMVYYRKRIRskd 74  Pneumocystis ji...
EPY53471      14 NIPFilyrglnlPPNF-------------AAFRVPLNVNKFDVRDYLLHVYNLKTLS--------VKTNIYQGSLYRney 72  Schizosaccharom...
XP_002172065  17 NLIFtlykrsnlPPNF-------------AAFKVPLHVNKFDVRDYLLHVYNLKVLS--------VRSMIFARKLYRnrm 75  Schizosaccharom...
XP_003009215  24 nHVItfhrkdhnPPNW-------------ATFEVPLRFNKFDIRDYLWNLYGVETTA--------VRSWVKMPPVERkld 82  Verticillium al...
KIL92740      26 nhVItflrkehlPPNE-------------ATFQVPLRFTKFDLRDYLWNLYDVEVTK--------VRSYVKQQPLTQrns 84  Fusarium avenaceum
XP_006681413  15 NIVVrmvr-snlPPHQ-------------AVFRCPQQLNKLDMKSYLSQLYNITITD--------IRTMNYTGSTVKk-- 70  Batrachochytriu...
EPB90838      16 NIVFkl----vrAPNLqp---------nqVAFRVPPSCNKFDIHSYLTNIYGVNVQE--------VRTMNYATVHKKaRn 74  Mucor circinell...
3PIO_Q        67 rfi--gqrN-------------DRKKAIVRL-AEGQSIE 89  Deinococcus radiodurans
Q09727        73 gq--vkrpQ-------------SEKRVIVEM---EEPFV 93  Schizosaccharomyces pombe 972h-
CCJ30603     205 ----------------------GTKKAYVKLsSDMDALD 221 Pneumocystis jirovecii
CCJ30962      75 ylrtikrtP-------------AFKKVIVDM---KEPFI 97  Pneumocystis jirovecii
EPY53471      73 gq--vrrqA-------------ATKRAIVEM---EEPFI 93  Schizosaccharomyces cryophilus OY26
XP_002172065  76 gq--vkrpK-------------SIKKVIVEM---EEPFV 96  Schizosaccharomyces japonicus yFS275
XP_003009215  83 grgaayhpK-------------SIKFMTVEL---TRPFV 105 Verticillium alfalfae VaMs.102
KIL92740      85 hsrswyrpK-------------PLKVMTVEL---AKPFQ 107 Fusarium avenaceum
XP_006681413  71 -------nAgpkrpgrgkmtspSYKKVIITM---DDDFV 99  Batrachochytrium dendrobatidis JAM81
EPB90838      75 gkm-evqsS-------------AYKKAIVTL---DETFH 96  Mucor circinelloides f. circinelloides 1006PhL
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