Conserved Protein Domain Family
SNARE_syntaxin2

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cd15882: SNARE_syntaxin2 
SNARE motif of syntaxin 2
Syntaxin 2 (STX2), also known as epimorphin (EPM or EPIM), may interact with SNAP-23 (Qb/c) and genetic varioations are associated with type 1 von Willebrand disease (VWD). Syntaxin 2 is a member of the Qa subgroup of SNARE (soluble N-ethylmaleimide-sensitive factor attachment protein receptor) proteins, which consist of coiled-coil helices (called SNARE motifs) that mediate the interactions between SNARE proteins, and a transmembrane domain. The SNARE complexes mediate membrane fusion, important for trafficking of newly synthesized proteins, recycling of pre-existing proteins and organelle formation. SNARE proteins are classified into four groups, Qa-, Qb-, Qc- and R-SNAREs, depending on whether the residue in the hydrophilic center layer of the four-helical bundle is a glutamine (Q) or arginine (R). Qa-, as well as Qb- and Qc-SNAREs, are localized to target organelle membranes, while R-SNARE is localized to vesicle membranes. They form unique complexes consisting of one member of each subgroup, that mediate fusion between a specific type of vesicles and their target organelle.
Statistics
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PSSM-Id: 277235
Aligned: 4 rows
Threshold Bit Score: 120.919
Created: 13-Apr-2012
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
zero layerheterotetramer
Feature 1:zero layer
Evidence:
  • Comment:polar interaction between Arg of R-SNARE, and Gln from Q-SNARE
  • Citation:PMID 9759724

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                           #                                 
NP_001086863 191 ALNEIESRHKDIIKLESSIRELHDMFVDIATLVESQGEMINSIEKNVENAAEYIEHAKEETKKAVKYQS 259 African clawed frog
Q00262       191 ALNEIESRHKDIMKLETSIRELHEMFMDMAMFVETQGEMVNNIERNVVNSVDYVEHAKEETKKAIKYQS 259 house mouse
XP_003199177 192 ALNEIESRHQDILRLESSIKELHDMFVDMAMLVETQGEMIDNIEKNVHNAVEYVGQAKVETKKAVRYQT 260 zebrafish
BAC00814     189 ALNEIESRHKDIMKLETSIRELHEMFMDMAMFVETQGEMINNIEKNVMNATDYVEHAKEETKKAVKYQS 257 common quail

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