2KYU,3LQH


Conserved Protein Domain Family
PHD3_KMT2A

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cd15592: PHD3_KMT2A 
Click on image for an interactive view with Cn3D
PHD finger 3 found in histone-lysine N-methyltransferase 2A (KMT2A)
KMT2A (also termed ALL-1, CXXC-type zinc finger protein 7, myeloid/lymphoid or mixed-lineage leukemia protein 1 (MLL1), trithorax-like protein (Htrx), or zinc finger protein HRX) is a histone methyltransferase that belongs to the MLL subfamily of H3K4-specific histone lysine methyltransferases (KMT2). It regulates chromatin-mediated transcription through the catalysis of methylation of histone 3 lysine 4 (H3K4), and is frequently rearranged in acute leukemia. KMT2A functions as the catalytic subunit in the MLL1 complex, which also contains WDR5, RbBP5, ASH2L and DPY30 as integral core subunits required for the efficient methylation activity of the complex. The MLL1 complex is highly active and specific for H3K4 methylation. KMT2A contains a CxxC (x for any residue) zinc finger domain, three plant homeodomain (PHD) fingers, a Bromodomain domain, an extended PHD (ePHD) finger, Cys2HisCys5HisCys2His, two FY (phenylalanine tyrosine)-rich domains, and a SET (Suppressor of variegation, Enhancer of zeste, Trithorax) domain. This model corresponds to the third PHD finger.
Statistics
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PSSM-Id: 277067
Aligned: 5 rows
Threshold Bit Score: 96.9805
Created: 13-Aug-2013
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Zn binding siteputative
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C C H C C CClick to see conserved feature residue pattern help
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1       #  #               #  #    #  #                     #  #
2KYU_A       7 FCPLCDKCYDDDDYEsKMMQCGKCDRWVHSKCENLsDEMYEILSNLPESVAYTCVNC 63   human
3LQH_A       4 FCPLCDKCYDDDDYEsKMMQCGKCDRWVHSKCENLsDEMYEILSNLPESVAYTCVNC 60   human
AAI55711  1528 FCPLCNKCYDDDDYEsKMMQCGKCDRWVHSKCENLtDEMYEILSNLPESVAYTCINC 1584 western clawed frog
EMP33388  1302 FCPLCDKCYDDDDYEsKMMQCGKCDRWVHSKCENLsDEMYEILSNLPESVAYTCINC 1358 green seaturtle
O93291    1805 ICVLCNKCYEDDEADgKMVECGRCHHRVHAKCEKLtDDMYELLSKLPESVAYTCTKC 1861 torafugu

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