4OLE


Conserved Protein Domain Family
NBR1_like

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cd14947: NBR1_like 
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Functionally uncharacterized domain in neighbor of Brca1 Gene 1 and related proteins
NBR1 has been characterized as a specific late endosomal protein, which might play a role in receptor (RTK) trafficking. Specifically, NBR1 was shown to inhibit ligand-mediated receptor internalization from the cell surface. The region covered by this domain model may be involved in that function, as the C-terminus (which contains a UBA domain) was shown to be essential but not sufficient by itself. In an earlier yeast two-hybrid study, the region in mouse NBR1 covered by this domain has been shown to interact with CIB (calcium and integrin-binding protein) and FEZ1 (fasciculation and elongation protein zeta-1). Thus, NBR1 may play a role in cellular signalling pathways and possibly in neural development.
Statistics
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PSSM-Id: 271343
Aligned: 197 rows
Threshold Bit Score: 70.3977
Created: 11-Jun-2014
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4OLE_A         6 PXLSAAFv-DENLP-DGTHLQp-GTKFIKHWRXKNTGn-VKWSADTKLKFXWGNlt----------------lASTEKKD 65  human
ETK25524      97 RSDIAVFnaDVTTP-DQTVVLp-GETFHKTWEIQNIGa-QPWRGRKLVRVDGEYviarrsamgtplevvmdthLRSLNNE 173 Pseudomonas sp....
WP_017777858  74 SQDVAVFnaDVTTP-DHAIVLp-GEVFQKVWEIQNLGk-RPWTGRRLVRVDGEYvmarrtqhkteleivldahLSSLHRE 150 Burkholderia ku...
WP_008368746  21 IKDAALFq-YEYPP-DMSIVSp-GEKINHTWVIKNVGd-TLWENRYYECNQSMMe------------------LDEKNRI 78  Coprococcus comes
WP_022171901 184 EKDGILFq-YEYPP-DMGIVSp-GEIINHTWVMKNVGn-ILWENRYYECNQSVIe------------------LDEKNRI 241 Blautia sp. CAG:52
WP_008368746 143 RGENYNVi-EEIPR-LSAPIIa-GNLYSHTWIIQNTGm-TIWNEYYLECINGDN-------------------FSYVKKE 199 Coprococcus comes
WP_022171901 307 VKNGGNYkvIEEIP-RHPVTSisGKLHSHTWIIENTGt-TIWNEYYLECINGDN-------------------FSYAKRE 365 Blautia sp. CAG:52
YP_004172728 109 SPYTCRL--VSQVPrDGSTIKp-NTQFTVTWTVQNVGkvIWEDIGIDLVQMGGD-------------------KIAVQTI 166 Anaerolinea the...
YP_004174197 130 LPLEGKCkvLAQSPeDGKTIKa-GETFRVSWTLQNTSt-EPWRSDSIDVRFKGGv-----------------pMHTSKDV 190 Anaerolinea the...
YP_004174930 122 TGDKAEW--VSQSPtDGTQIKk-GEKFLVKYVLKNIGt-TTWSTKYTFRYYAGD-------------------KMGSPND 178 Anaerolinea the...
4OLE_A        66 VLVPCLka---ghVGVVSVEFIAPalEGTYTSHWRLSHkg--qQFGPRVWCSIIVD 116 human
ETK25524     174 IPIAQTlp---gqPVHITVEFAAPkeTCTVTSIWRIEDehgqpCYGPAFILHVIVN 226 Pseudomonas sp. FH1
WP_017777858 151 IAIPDThp---gqPVRLAVDFAAPreSCTVASIWRIEDsdgrpCYGPSFILHVVVT 203 Burkholderia kururiensis
WP_008368746  79 LRIPKFvyp--gdKVSPSVSFYAPdkPGTYVMNWKMKDskgkiVFPDKLGIGLHFM 132 Coprococcus comes
WP_022171901 242 LHLPQVvyp--gdKVSPSVSFYAPetPGTYVMNWKMKDgngneAFPDRLGLGLHFM 295 Blautia sp. CAG:52
WP_008368746 200 LCVPLKahvmpgeKISVKVEFATPpiEGIYTMVWQIMKkdgtpAFAKNRRLEVLLN 255 Coprococcus comes
WP_022171901 366 LCVPFKkrvmpgeRISVKVEFATPpiEGIYSMVWQIMKkdgtpAFPKNRKLEVLLN 421 Blautia sp. CAG:52
YP_004172728 167 YDLPRTvkp--geSVDLQVELKAPeaTGYYRTDWKLAIvd-qgFTFCPLYVDFWVS 219 Anaerolinea thermophila UNI-1
YP_004174197 191 IDLPKSvep--ngTIDITITMTAPekAGYQITYWTLSAg---sTVKCTFYVEIFVE 241 Anaerolinea thermophila UNI-1
YP_004174930 179 LNLTKEvkp--kdTVEIVFELTAPdkTGKTNTIWVLTNdq--gINFYSVFLSIEVV 230 Anaerolinea thermophila UNI-1
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