3MDY


Conserved Protein Domain Family
STKc_BMPR1b

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cd14219: STKc_BMPR1b 
Click on image for an interactive view with Cn3D
Catalytic domain of the Serine/Threonine Kinase, Bone Morphogenetic Protein Type IB
STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. BMPR1b, also called Activin receptor-Like Kinase 6 (ALK6), functions as a receptor for bone morphogenetic proteins (BMPs), which are involved in the regulation of cell proliferation, survival, differentiation, and apoptosis. BMPs are able to induce bone, cartilage, ligament, and tendon formation, and may play roles in bone diseases and tumors. Mutations in BMPR1b that led to inhibition of chondrogenesis can cause Brachydactyly (BD) type A2, a dominant hand malformation characterized by shortening and lateral deviation of the index fingers. A point mutation in the BMPR1b kinase domain is also associated with the Booroola phenotype, characterized by precocious differentiation of ovarian follicles. BMPR1b belongs to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, BMPs, activins, growth and differentiation factors, and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane (TM) region, and a cytoplasmic catalytic kinase domain. Type I receptors, like BMPR1b, are low-affinity receptors that bind ligands only after they are recruited by the ligand/type II high-affinity receptor complex. Following activation, they start intracellular signaling to the nucleus by phosphorylating SMAD proteins. Type I receptors contain an additional domain located between the TM and kinase domains called the GS domain, which contains the activating phosphorylation site and confers preference for specific SMAD proteins. The BMPR1b subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.
Statistics
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PSSM-Id: 271121
Aligned: 5 rows
Threshold Bit Score: 632.47
Created: 11-May-2010
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 18 residues -Click on image for an interactive view with Cn3D
Feature 1:ATP binding site [chemical binding site]
Evidence:
  • Structure:3MDY: Human BMPR1b binds a pyrazolo inhibitor; contacts at 4A.
    View structure with Cn3D
  • Comment:also based on the binding of MgADP or inhibitors to other members of the TGFbeta Receptor subfamily

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                    ####### #          # #                                              
3MDY_A        33 RTIAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYL 112 human
Q05438       198 RTIAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYL 277 chicken
NP_571532    226 RTIAKQIQMVTQIGKGRYGEVWMGRWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHDNILGFIAADIKGTGSWTQLYL 305 zebrafish
NP_001072633 228 RTIAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYL 307 western clawed ...
O00238       198 RTIAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYL 277 human
Feature 1         ## #   #                                                 ## #          #       
3MDY_A       113 ITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKF 192 human
Q05438       278 ITDYHENGSLYDYLKSTTLDTKGMLKLAYSSVSGLCHLHTGIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKF 357 chicken
NP_571532    306 ITDYHENGSLYDYLKCTTLDSRAMLKLAYSSVSGLCHLHTEIFGTQGKPAIAHRDLKSKNILVKRNGACCIADLGLAVKF 385 zebrafish
NP_001072633 308 ITDYHENGSLYDYLKSTTLDTKAMLKLAYSTVSGLCHLHTEIFGTKGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKF 387 western clawed ...
O00238       278 ITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKF 357 human
Feature 1                                                                                        
3MDY_A       193 ISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSgGIVEEYQLPYHDLVPSDPSY 272 human
Q05438       358 ISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEIARRCVSgGIVEEYQLPYHDLVPSDPSY 437 chicken
NP_571532    386 ISDTNEVDIPLNTRVGTKRFMAPEVLDETLNRNHFQSYIMADMYSFGLILWEISRRCVTgGIVEEYQLPYHDHVPNDPSY 465 zebrafish
NP_001072633 388 ISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCISgGILEEYQLPYHDVVPSDPSY 467 western clawed ...
O00238       358 ISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSgGIVEEYQLPYHDLVPSDPSY 437 human
Feature 1                                                                         
3MDY_A       273 EDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQDIKL 337 human
Q05438       438 EDMREIVCIKRLRPSFPNRWSSDECLRQMGKLMMECWAHNPASRLTALRVKKTLAKMSESQDIKL 502 chicken
NP_571532    466 EDMREVVCIKRIRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQDIKV 530 zebrafish
NP_001072633 468 EDMREIVCIRRFRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQDIKL 532 western clawed frog
O00238       438 EDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQDIKL 502 human

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