1W4S


Conserved Protein Domain Family
BAH_polybromo

?
cd04717: BAH_polybromo 
Click on image for an interactive view with Cn3D
BAH, or Bromo Adjacent Homology domain, as present in polybromo and yeast RSC1/2. The human polybromo protein (BAF180) is a component of the SWI/SNF chromatin-remodeling complex PBAF. It is thought that polybromo participates in transcriptional regulation. Saccharomyces cerevisiae RSC1 and RSC2 are part of the 15-subunit nucleosome remodeling RSC complex. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of these instances the BAH domain mediates protein-protein interactions.
Statistics
?
PSSM-Id: 240068
Aligned: 36 rows
Threshold Bit Score: 146.575
Created: 18-Sep-2006
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
1W4S_A         24 NSMYHVGDYVYVEPAea------------------------nlQPHIVCIERLWEdsageKWLYGCWFYRPNETFHLATR 79   chicken
CAC70157      966 GIIYRVNDYAYVAPSeet-----------------------vsQRHIMRIERLYRdsdgqTFARGTWCYRPEETFHLATR 1022 agent of lymp...
NP_060959    2655 DLLLRQGDCVYLMRDsrrtpdghpvrq-----syrllshinrdKLDIFRIEKLWKnekeeRFAFGHHYFRPHETHHSPSR 2729 human
XP_784903    3011 TLMVKQGDCVYLAHEnqrrnpdgspmr----tsarimanttpdKFNIFRVEKLWKteigeRFVFGHHFLRPHETHHTPSR 3086 purple urchin
XP_422858    2645 ELLLRQGDCVYLMRDsrrtpdghpvrq-----syrllshinreKLDIFRIEKLWKnekeeRFAFGHHYFRPHETHHSPSR 2719 chicken
CAK04993      710 DLLLHQGDCVYLMRDsrrttegqpvrq-----syrllshinrdKLDIFRIEKLWKnekgeRFAFGHHYFRPHETHHSPSR 784  zebrafish
XP_001122948 1904 DLQLRQGDTVYVLRDtpekhtyk------------tiqkpdyeQMDIFRIERLWKnaegeRFVFGHHYLRPHETYHEPTR 1971 honey bee
EAT38425     1812 NLQIRQTDTVYVLRDipmapdpsnpngpprkhtyetigkvdyaECDIFRVESLWKdkegrRFVYGHHYLRPHETYHEPTR 1891 yellow fever ...
1335892      1913 DLQVRQGDAVYVLRDipikdesgkvlptk-khtyetigaidyqECDIFRVEHLWKnelgkRFIFGQHFLRPHETFHEPSR 1991 fruit fly
BAE06763      449 DMQVKQGDCVRMIHDhrlrqrpssqppv--rssyrlqshstpdTMDFFRIKKLWTddngdKFAYGHHFLRPHDTRHNEGR 526  Ciona intesti...
1W4S_A         80 KFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDe-DVYVCESRYSAkt-kSFKKIKL 144  chicken
CAC70157     1023 KFCENEVFLTSYYDTVTVDRLIGKCHVMPVRQFMRQKPKGFEDs-DIYVCECRYMGrq-lHFKKLKH 1087 agent of lymphatic filariasis
NP_060959    2730 RFYHNELFRVPLYEIIPLEAVVGTCCVLDLYTYCKGRPKGVKEq-DVYICDYRLDKsa-hLFYKIHR 2794 human
XP_784903    3087 KFFRNELFRVPLYEIIRLESIVGLCCVMDLAKYCKGRPKGVKEq-DVYVCEYRLDRta-hLFSPIGK 3151 purple urchin
XP_422858    2720 KFYHNELFRVPLYEIIPLEAVVGTCCVLDLYTYCKGRPKGVKEq-DVYICDYRLDKsa-hLFYKIHR 2784 chicken
CAK04993      785 RFYHNELFRVPLYEIIPLEAVVGTCCVLDLYTYCKGRPKGVKEq-DVYICDYRLDKsa-hLFYKIHR 849  zebrafish
XP_001122948 1972 KFYENEVVCAPLYEAVPCDLVAERCWVLDPHTYCKGRPVGSTPe-HTYVCEYRVDRaa-rLFTKVAR 2036 honey bee
EAT38425     1892 RFYPNEVMRVPLFEVIPIELVMERCWVLDPTTFCKGRPVDSSEp-HVYICELRVDKsa-rLFSKISR 1956 yellow fever mosquito
1335892      1992 RFYPNEVVRVSLYEVVPIELVIGPCWLLDRPTFSKGPPMECNDedHCYICELRVDKta-rFFSKAKA 2057 fruit fly
BAE06763      527 LFYNNELVATPFHEIVPLEAVVSICCLMDFETYCLGRPKGVKDe-DIYICQHRVDLsfriVERVIKT 592  Ciona intestinalis
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap