Conserved Protein Domain Family
RhoGAP_ARHGAP21

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cd04395: RhoGAP_ARHGAP21 
RhoGAP_ARHGAP21: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of ArhGAP21-like proteins. ArhGAP21 is a multi-domain protein, containing RhoGAP, PH and PDZ domains, and is believed to play a role in the organization of the cell-cell junction complex. It has been shown to function as a GAP of Cdc42 and RhoA, and to interact with alpha-catenin and Arf6. Small GTPases cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when GDP-bound. The Rho family of GTPases activates effectors involved in a wide variety of developmental processes, including regulation of cytoskeleton formation, cell proliferation and the JNK signaling pathway. GTPases generally have a low intrinsic GTPase hydrolytic activity but there are family-specific groups of GAPs that enhance the rate of GTP hydrolysis by several orders of magnitude.
Statistics
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PSSM-Id: 239860
Aligned: 9 rows
Threshold Bit Score: 362.873
Created: 12-Apr-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative GTPasecatalytic
Feature 1:putative GTPase interaction site [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                              #                                       
XP_683900 1028 TFGVRLDDCPPAqnNRFVPLIVEVCCNLVEeRGLEYTGIYRVPGNNAAISIMQEELNNkgmad-----idiqDDKWKDLN 1102 zebrafish
AAA18934   779 VLGVRIADCPTGscEDHVPMIVQACVCVIEtYGMDTVGIYRIPGNTAAVNALKESLSNrgfdsvdlskveslDPRWRDVN 858  nematode
BAA96025   493 AFGVRLEECQPAteNQRVPLIVAACCRIVEaRGLESTGIYRVPGNNAVVSSLQEQLNRgpgd------inlqDERWQDLN 566  human
AAL13832   568 SIGVPLRSCPMSkvNAYVPHLVEVCTNIVEtKGLGVVGIYRIPGNKAAISELSELVNTkdfqf----escasDDRWEDVN 643  fruit fly
AAQ04821  1100 TFGVRLDDCPPAhnNKYVPLIVDVCCKLVEdRGLETTGIYRVPGNNAAISSMQEELNKgntd------idiqDDKWRDLN 1173 African clawed frog
XP_418602 1830 TFGVRLDDCPPAhtNKYIPLIVDICCKLVEeRGLEYTGIYRVPGNNAAISSMQEELNKgmtd------idvhDDKWRDLN 1903 chicken
XP_797751  304 TFGVPLDECAASqsNELVPMVVEICCSIIEaKGMDYVGIYRVPGNSGGISYLKEELKKgvde------idltDERWQDVN 377  purple urchin
XP_974551 1142 TFGIPIEQCLTSstNPYVPRFVEVCTDIVDaHGLQTVGIYRVPGNNASIVALIDEINRnyee------vpvdDPRWNDLH 1215 red flour beetle
EAT38896   171 SINVPLQLCPPSdeNPYVPLLLAKCTNIVEsRGLGVIGIYRIPGNTAAISQLTEQVNRgmde------vtlrDPKWDDVN 244  yellow fever mos...
Feature 1            #   #                                                                    #
XP_683900 1103 VISSLLKSFFRKLPEPLFTnERYADFIDGNRiedpveRLKVLKRLLHeLPDHHYETLKFLSAHLKTVAENSEKNKMEPRN 1182 zebrafish
AAA18934   859 VVSSLLKMFLRKLPEPLLTdKLYPFFIDANRisthhnRLHKLRNLLRkLPRPHYDTLRFLIVHLSEITKHSDVNKMECRN 938  nematode
BAA96025   567 VISSLLKSFFRKLPEPLFTdDKYNDFIEANRiedareRMRTLRKLIRdLPGHYYETLKFLVGHLKTIADHSEKNKMEPRN 646  human
AAL13832   644 VVSSLLKLFIRSLPDALMPaSYYINFIEADKkfg-leRIVLLREIVEsLPRHPYETMKHLIRHLCRVSGNCDVNRMEPKN 722  fruit fly
AAQ04821  1174 VISSLLKSFFRKLPDPLFTnEKYNDFIEANRkedpveRLKTLKRLILdLPDHHYETLKYLSAHLKTVADSSEKNKMEPRN 1253 African clawed frog
XP_418602 1904 VISSLLKSFFRKLPEPLFTnDKYADFIDANRkedpveRLKTLKRLIHdLPEHHYETLKFLSAHLKTVAENSEKNKMEPRN 1983 chicken
XP_797751  378 VISSLMKLFFRKLPNPMVPnNQYKDFIAANRmeepseRMWALRRQIHnLPDHHYESFKYLANHLKGVAANADVNRMEVRN 457  purple urchin
XP_974551 1216 VVSSLLKAFFRKIPDSLVTsALYPSFIKADKienpeaRMKELKRLIKsLPPHNYHTLKHIMFHLKKVMDNSEINKMEAKN 1295 red flour beetle
EAT38896   245 VVSSLLKSFIRNLPEPLLPnEMYHSFINADKltg-qqRLIELRQLLHrIPAYNYETLKHLMRHLNIVSTNAQVNLMDPRN 323  yellow fever mos...
Feature 1        ##                       #              
XP_683900 1183 LAIVFGPTLVRTSEDNMTHMVTHMPDQYKIVETLIQHYDWFF 1224 zebrafish
AAA18934   939 LALMFGPSIVRPSDDNMATMVTHMSDQCKIIETLIHYNLWMF 980  nematode
BAA96025   647 LALVFGPTLVRTSEDNMTDMVTHMPDRYKIVETLIQHSDWFF 688  human
AAL13832   723 LAIIFGPSIIRTPNDTLETAVKDMKHQCRIVELLVTQYDYFF 764  fruit fly
AAQ04821  1254 LAIVFGPTLVRTSEDNMTHMVTHMPDQYKIVETLIQKHDWFF 1295 African clawed frog
XP_418602 1984 LAIVFGPTLVRTSDDNMTHMVTHMPDQYKIVETLIQKHDWFF 2025 chicken
XP_797751  458 LAIVFGPTLVRSGDDSMVTMVTDMSDQCKIVESLILHCDWFF 499  purple urchin
XP_974551 1296 LAIVFGPNIVRPEDDNMETMVSNMTHQYKIVETLLTSADWFF 1337 red flour beetle
EAT38896   324 LAIVFGPSVVRSANESLETAVKDMKHQCQIVEVLINHYSYFF 365  yellow fever mosquito

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