Conserved Protein Domain Family
RhoGAP_CdGAP

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cd04384: RhoGAP_CdGAP 
RhoGAP_CdGAP: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of CdGAP-like proteins; CdGAP contains an N-terminal RhoGAP domain and a C-terminal proline-rich region, and it is active on both Cdc42 and Rac1 but not RhoA. CdGAP is recruited to focal adhesions via the interaction with the scaffold protein actopaxin (alpha-parvin). Small GTPases cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when GDP-bound. The Rho family of GTPases activates effectors involved in a wide variety of developmental processes, including regulation of cytoskeleton formation, cell proliferation and the JNK signaling pathway. GTPases generally have a low intrinsic GTPase hydrolytic activity but there are family-specific groups of GAPs that enhance the rate of GTP hydrolysis by several orders of magnitude.
Statistics
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PSSM-Id: 239849
Aligned: 7 rows
Threshold Bit Score: 319.834
Created: 12-Apr-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative GTPasecatalytic
Feature 1:putative GTPase interaction site [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                #                                       #
NP_610002     420 RVFNCDLsehllnsgqdIPMVLRSCAEFIEnYGVIDGIYRLSGITSNIQRLRRAFDEERVPDLgnpemkqDIHAVSSLLK 499  fruit fly
NP_001024683  276 PIFGLELtdlymrtgkkVPVIVEKCCASIEdQGIVTGIYRQCGIQSNIQRLRAKFDSGAEPDLhef-gqrDIYSVSSLLK 354  nematode
CAD89974      302 RVFGCDLgehllnsgfeVPQVLQSCTAFIErYGIVDGIYRLSGVASNIQRLRHEFDSEHVPDLtkepyvqDIHSVGSLCK 381  human
AAH73211      371 RVFGCDLgehllnsgqdVPQVLRSCTEFIEkHGVVDGIYRLSGIASNIQKLRHEFDSEQIPDLtkdvyiqDIHCVGSLCK 450  African clawe...
XP_697910     482 RVFGCDLgehllnsghdVPQVLKSCTEFIEkHGVVDGMYRLSGIASNIQKLRHEFDSEQIPDLtkdvyiqDIHCVGSLCK 561  zebrafish
XP_417865      11 KQRGILKerv-----fgFPQVLKSCTEFIEkHGIVDGIYRLSGVASNIQKLRHEFDSEQIPDLtkdnyihDIHSVSSLCK 85   chicken
NP_064656      17 SAFGCDLteylessgqdVPYVLKSCAEFIEtHGIVDGIYRLSGITSNIQRLRQEFGSDQCPDLtrevylqDIHCVGSLCK 96   house mouse
Feature 1            #                                                                      #  ## 
NP_610002     500 MYFRELPNPLCTyQLYDNFVEAiqvkadeaDERLRLMKETVLkLPPPHYRTLKYLAEHLYKVSQHHGRTGMTDKNLAIVW 579  fruit fly
NP_001024683  355 QYFRQLPNPLFTyQAYPKLIEAfeke-dslSEKVESLRFSLEtMPEAHYRTAKFLMEHLTRLCKSKSLTDMTSKNLAIVW 433  nematode
CAD89974      382 LYFRELPNPLLTyQLYEKFSDAvsa--atdEERLIKIHDVIQqLPPPHYRTLEFLMRHLSLLADYCSITNMHAKNLAIVW 459  human
AAH73211      451 LYFRELPNPLLTyQLYEKFSDAvsa--asdEERLVKIHDVIQqLPPPHYRTLEFLMRHLSRLATYCSITNMHTKNLAIVW 528  African clawe...
XP_697910     562 LYFRELPNPLLTyQLYEKFSEAvsa--atdEERLIKIHDVIQqLPPPHYRTLEFLMRHLSHLATFSYVTNMHTKNLAIVW 639  zebrafish
XP_417865      86 MYFRELPNPLLTyQLYEKFSDAvsa--atdEERLVRIHDVIQqLPPPHYRTLEYLMRHLARLADYCTITNMHAKNLAIVW 163  chicken
NP_064656      97 LYFRELPNPLLTyELYEKFTEAvsh--rpeEGQLARIQNVILeLPPPHYRTLEYLIRHLAHIASFSSKTNMHARNLALVW 174  house mouse
Feature 1                                    #         
NP_610002     580 APNLLRSpalesgg---vaalrgVGVQAVVTEYLIRN 613  fruit fly
NP_001024683  434 SPNLFRPpptlng----adthllSGLNVHTAICDFFI 466  nematode
CAD89974      460 APNLLRSkqiesacfsgtaafmeVRIQSVVVEFILNH 496  human
AAH73211      529 APNLLRSkqiesacfsgtaafmeVRIQSVVVEFILNH 565  African clawed frog
XP_697910     640 APNLLRSkqiesacfsgtaafmeVRIQSVVVEFILNH 676  zebrafish
XP_417865     164 APNLLRSkqiesacfsgtaafmeVRIQSVVVEFILNH 200  chicken
NP_064656     175 APNLLRSkkieaticngdaaflaVRVQQVVIEFILNH 211  house mouse

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