Conserved Protein Domain Family
SOCS_ASB13

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cd03729: SOCS_ASB13 
SOCS (suppressors of cytokine signaling) box of ASB13-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. The general function of the SOCS box is the recruitment of the ubiquitin-transferase system. The SOCS box interacts with Elongins B and C, Cullin-5 or Cullin-2, Rbx-1, and E2. Therefore, SOCS-box-containing proteins probably function as E3 ubiquitin ligases and mediate the degradation of proteins associated through their N-terminal regions.
Statistics
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PSSM-Id: 239699
Aligned: 6 rows
Threshold Bit Score: 80.2141
Created: 3-May-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative
Feature 1:putative elongin B/C interaction [polypeptide binding site]
Evidence:
  • Comment:based on the homology to the human SOC2 complex

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1      ######     #         #     #    #        
BAB14456  237 KTPLTLSQLCRVNLRKATGVRGLEKIAKLNIPPRLIDYLSYN 278 human
AAH76370  239 SNPLSLQQLCRIIIRTMVGTRAMELIPKLDISQRIIDYLMFK 280 zebrafish
AAI06593  248 KTPRSLYQLCRLNLRKTLGQRAVEKILKLNIPTRLKQYLTYN 289 African clawed frog
XP_414987 487 KTPLSLSQLCRVTVRKAAGQRALEKIAKLNIPQRLIQYLSYN 528 chicken
XP_692009 239 SSPLSLQQICRITLRTVLGTNAEDVVGKLDIPNRIISYLLYR 280 zebrafish
XP_684802 308 STPLSLQQLCRISLRNALGKRALGVFTQLGLPNRIIWFLSYL 349 zebrafish

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