Conserved Protein Domain Family
TCP1_eta

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cd03340: TCP1_eta 
TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Statistics
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PSSM-Id: 239456
Aligned: 23 rows
Threshold Bit Score: 803.814
Created: 6-Jan-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:stacking interactions
Evidence:
  • Comment:interactions of one subunit to subunits of the second ring
  • Comment:annotation based on structure of bacterial homolog GroEL

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                     
XP_756712  13 PIILLREDTDVSQGTSQLLHNIGACSSIVSCVASTLGPRGMDKLIVNe--rGQATISNDGATILKLLDIVHPAAKTLVDI 90  Ustilago maydis 521
XP_635173   8 PIVLLKEGTDTSQGLPQLISNINACCAIVDTVRTTLGPRGMDKLIYQs--eRQVTISNDGATVMKLLDIVHPAARTLVDI 85  Dictyostelium disc...
CAH03492    8 TILLLREGTDTSQGRAQIVSNINAVQAVADVVKSTLGPRGMDKMIQTg---PKVTISNDGATILNLLEVVHPAARVLVDI 84  Paramecium tetraur...
EAL51822    5 TIILLKEGTDTSQGKGQIISNINACQAIADIVKTTLGPRGMDKLFIEn---GKILVTNDGATVMKNLDIVHPAAKALVDI 81  Entamoeba histolyt...
XP_330350   9 TIIVLKEGTDTSQGKPQIISNINACLAVQATIKSTLGPYGGDLLMVDa--nGKQTITNDGATVMKLLDIVHPAARILVDI 86  Neurospora crassa
BAB83929    8 PILVLKEDTDTSQGKSQIISNINACQAVTNCIKTTLGPRGMDKLIHAe---NKVTITNDGATVLALLDIVHPAAAVLVDI 84  Babesia microti
XP_665218   5 PIILLKEGSDTSQGKGQILSNITACQAIVDIVKTTLGPYGMDKLIHSgnspDDVTITNDGATVLNLLGIVHPAAKLLVEI 84  Cryptosporidium ho...
AAG18498    5 PIILLREGVDQSQGLGQLISNINACHAIGEILASTLGPRGMDKLIHNsn-nRRAIVTNDGATVMKELDIVHPAAQLLVDV 83  Trichomonas vaginalis
NP_473202   8 PIVLLKEGTDTAQGRSQIIRNINACQIIVDIVKTTLGPRGMDKLIYTe---RDVTITNDGATVMNLLNISHPAASILVDI 84  Plasmodium falcipa...
EAN77071    5 QLILLREGTDASQGKPQLISNINACMNVVDTVKTTLGPCGMDKLIHNg---REVNISNDGATIMNLLEVVHPAAKCLVDI 81  Trypanosoma brucei
Feature 1                                                                                     
XP_756712  91 ARAQDAEVGDGTTSVVLLAGEMLKEAKPFIEEGVAPHIIIKGYRKAVQLAVEKINDMAVTIdksdkqefYDLLLKCAGTS 170 Ustilago maydis 521
XP_635173  86 AKSQDSEVGDGTTSVVILAGEFLKAAKPFLEEGIHPQIIIRAFRSACELAKQKIQELSVDIkpe---nmREFLEKCASTS 162 Dictyostelium disc...
CAH03492   85 AKSQDDEVGDGTTSTTLLAAELLKEAKPFIEEGIHPQIVIQGYRKALELALEKLEGFSINIsrdspqekRDTLLKCAQTA 164 Paramecium tetraur...
EAL51822   82 AMAQDSEVGDGTTTVVVLAGELLSQAKKLIEDGIHPQVIIKGYRMASNKAREVVNTMKIDFdkk---dlMEYLKNCAKTS 158 Entamoeba histolyt...
XP_330350  87 ARSQDAEVGDGTTSVVVLAGEILKEVKEHVEQGVSSQIIIKGLRRASTMAVNKIKEIAINTaes---nrRETLSKLAATA 163 Neurospora crassa
BAB83929   85 AKSQDDEVGDGTTSVTVLAGEFLSKAKDFIMEGMAPQTIIKYYREACKQALNIIDKIAINLsnkpyeetQKLLLRCAETT 164 Babesia microti
XP_665218  85 AKAQDDEVGDGTTSVVILAGEFLKEAKGFIEDGMSPQVIISGFRKASQIAIDKVNSMKISLseetpekrRSMLIKCAETT 164 Cryptosporidium ho...
AAG18498   84 AKSQDEEIGDGTTSVIVLSTSLLDAAKDFLEDGVHPQFICRCYRTALNAALKKLDEVAVTIdg----sqREVLEQCAATT 159 Trichomonas vaginalis
NP_473202  85 AKSQDDEVGDGTTSVVVVAGELLNEAKGLLNDGIEPNMIIDGFRNACNVAINKLNELSLNFsnkneeekRSILLKCAQTA 164 Plasmodium falcipa...
EAN77071   82 AISQDHEVGDGTTSVVVLAGELLKEAKNCVEDGIAPQVIIKAFRNALSVVMEALQKLCVPFdpna-eegRRNLVRCAETA 160 Trypanosoma brucei
Feature 1                                                                                     
XP_756712 171 MSSKLIVSqRPFFSKMVVDAVMSLDqddldqsLIGMKKVPGGGmqDSLLVHGVAFKKTFAYAGFEQQPKSFTNPKVLCLN 250 Ustilago maydis 521
XP_635173 163 MNSKLIAShKQFFSKMVVDAVQLLDdni-dldMIGIKKESGGGlgDSQFIAGAAFKRTFFYAGFEQQPKHIKNPKVLCLN 241 Dictyostelium disc...
CAH03492  165 LNSKLLANtKQFFSELVVSAVEKLDpnildrdLIGIKNVTGGSvnDSFLVDGVAFKKTFSYAGFEQQPKRFENPKICLLN 244 Paramecium tetraur...
EAL51822  159 MQSKLIAMqREHFTNIVVQSVMHLDdkl-didMIGIKKEQGGSleDSFTLEGVAFKKCFSYAGFEQQPKLFYKPKILCLN 237 Entamoeba histolyt...
XP_330350 164 MTSKLIKRnTDFFTEMVVDAVLSLDqedlnekLIGIKKIPGGSltDSLFVNGVAFKKTFSYAGFEQQPKSFKNPKICCLN 243 Neurospora crassa
BAB83929  165 LNSKLVSTyRSFFAKMVVDAVNILEddm-dkdMIGIKKVPGATclDSMLIKGVAFKKTFSYAGFEQQPKKFKNPKILLLN 243 Babesia microti
XP_665218 165 LNSKLLAHyKTHFAEVVVDAVSYLDnem-dkdLIGIKKINGGSvmDSFLVKGVAFKKTFSYAGFEQQPKHFVNPRILLLN 243 Cryptosporidium ho...
AAG18498  160 LRSKLVSDsRYFFAPMIVDAVLQLDedm-rlnDLGVKLVKGGSlqDSFFVPGVAFERTFSYAGFEQQPKHFKNPKILLLN 238 Trichomonas vaginalis
NP_473202 165 LNSKLVSNhKEFFGELVVNAVYKLGdnl-dksNIGIKKVTGGSclDTQLIYGVAFKKTFSYAGFEQQPKKFINPKILLLN 243 Plasmodium falcipa...
EAN77071  161 LNSKLINTeRYFFAKMATDAVLSLDndl-nldMIGIKKVPGGSmgESILVDGVAFKKTFSYAGFEQQPKKFQCPKVLLLH 239 Trypanosoma brucei
Feature 1                                                                                     
XP_756712 251 VELELKAEKDNAEVRINEVSEYQAVVDAEWQIIFNKLEAIVKTGAKVVLSKLPIGDLATQYFADRDIFCAGRVPADDMKR 330 Ustilago maydis 521
XP_635173 242 IELELKAEKDNAEIRISDPTKYQSLVNAEWKLFFDKLEAIHASGVNVVLSKLAIGDLATQFFADKNMFCAGRVPDDDIRR 321 Dictyostelium disc...
CAH03492  245 LELELKSEKENAEIRIEKPEEYQQIVDAEWALIYEKLDIIVKAGAQIVLSKLPIGDLATQYFADRNIFCAGRVPQEDLLR 324 Paramecium tetraur...
EAL51822  238 IELELKKEKDNAEVRIDDPTQYQKIVDAEWSILYEKLENIVKSGANIVLSKLPIGDLATQYFADRKIFCAGRVEEDDMKR 317 Entamoeba histolyt...
XP_330350 244 VELELKAEKDNAEVRVEQVSEYQAIVDAEWQIIYKKLEAVYATGAKVVLSKLPIGDLATQYFADRDIFCAGRVTSEDMER 323 Neurospora crassa
BAB83929  244 VELELKAEKDNAEIRINDPLIYQSIIDAEWKIIYDKLEAIYDIGANVVLSKLPIGDIATQFFAEKNIFCAGRVDEIDMKR 323 Babesia microti
XP_665218 244 LELELKAEKDNAEVRISDPTAYQSIVDAEWKIIFEKLDLIANSGVNVVLSRLAIGDLATQYFADRNIFCAGRVEEQDLKR 323 Cryptosporidium ho...
AAG18498  239 VELELKAEGTGAEVRVEDAKEFQEVVDAEWAIIFRKLNDCLNSGANIVISKKPIGDVATQFFADHDIFSAGRVPDEDFNR 318 Trichomonas vaginalis
NP_473202 244 VELELKAEKENAEVRIENPNEYNSIVQAEWDIIFKKLNLIKDCGANIVLSKLPIGDIATQFFADHDIFCAGRVEDADLKR 323 Plasmodium falcipa...
EAN77071  240 VELELKAEKDNAEVRVKDPKQYQSIVDAEWKIIFDKMEKCVRSGAKIVLSRLPIGDIATQYFADRDIFCAGRVAADDMAR 319 Trypanosoma brucei
Feature 1                                                                                     
XP_756712 331 VVQAVGGSVQst-csDINPDKHLGTCGKFEERQIGGeRFNIFEECPqaKTCTLILRGGAEQFIAEVERSLHDAIMIVRRA 409 Ustilago maydis 521
XP_635173 322 VCRATGAAIQnt--tSNIIPDVIGTCDLFEEVQVGGqRYNLFTGCTmtQTATIILRGGGEQFIDEAERSLHDSIMIVRRA 399 Dictyostelium disc...
CAH03492  325 VQKATGGQVQtt--vNGLNPETFGTCGLFEEVQVGAeRYNLFKNCPqsRTATIVLRGGAEQFIQEAERSLNDAIMIVRRC 402 Paramecium tetraur...
EAL51822  318 VCLATGAQIQtt--vSELNDSVLGTCGKFEEQQIGKeRYNLFSGCTaaKSSTIILRGGGEHFIDEAERSLHDAIMIVRRA 395 Entamoeba histolyt...
XP_330350 324 VVQATGATVQst--cSDILPEHLGTCGTFEERQIGGeRFNFFEDCPsaKTCTLVLRGGAEQFIAEVERSLHDAIMIVKRA 401 Neurospora crassa
BAB83929  324 VAKATGGLVQtt--iHGITDCCLGTCGVFEEMQLGSeRYNIFTECPntKTTTIILRGGAQQFIDEAERSLHDAIMIVRRS 401 Babesia microti
XP_665218 324 TSLATGAIVQttvygLNKDSGVFGTCSEFEEVQIGAeRYNIFRDCAktKSSTMILRGGAQQFIDEAERSLNDAIMIVRRA 403 Cryptosporidium ho...
AAG18498  319 LAKCTGASILst--tSNIEAKNLGTCADFEERQVGSkRFNIFTGGNg-RAATIVLRGGAEQFLEEAGRSIHDAIMIVRRA 395 Trichomonas vaginalis
NP_473202 324 TANATGALVQts--lFNLNDDVLGTCGVFEEVQIGNeRYNIFKECLktKSVTIILRGGAKQFIEEVERSINDAIMIVLRC 401 Plasmodium falcipa...
EAN77071  320 VALATGGVVQst--vSNITEDVLGSCALFEERQVGPeRYNFFTGCRnsKTVTIILRGGAQQFIDEADRSLHDAICIVKRA 397 Trypanosoma brucei
Feature 1                                   #                 #        # ##  #                
XP_756712 410 IKNsHVVAGGGATEMELSKYLRDYSRTIq-GKQQLVIGAFAKSLECIPRQLADNAGFDATDLLNRLRMKHAhga---qwE 485 Ustilago maydis 521
XP_635173 400 RKHrSVVAGGGAIEMEVSKYLRDYSLSIe-GKKQLLINAFAKALEVIPRQIADNAGFDSTDILNQLRQKHAqge---kwF 475 Dictyostelium disc...
CAH03492  403 FKAnKIVAGGGAIELELSRYLRHYARSVt-GKTQYIVNSFAKALEVIPRTIAENAGLNSIEIMNKLRQRHAqggeegrwY 481 Paramecium tetraur...
EAL51822  396 LKHkQMVTGGGAVEMEISRQLKEYAMTIe-GKIQYVILGYAKAFEGIPRQLADNAGFDPTNILNLLRKKHAegg---lwY 471 Entamoeba histolyt...
XP_330350 402 IRNkTIVGGGGAVEMEVSAYLHRFADRDvaHKQQAIIKSFAKALEIIPRQLCDNAGFDATDILNKLRVEHRkgn---twA 478 Neurospora crassa
BAB83929  402 IKTnSIVVGGGAIEMEISRILREYSLSIm-GKQQLIIHAYAKALECIPQTLARNSGFDATDVLNKLRKEYAmnkgqgmkY 480 Babesia microti
XP_665218 404 MKSsYIVPGGGAIEMAVSKTIRDHARTIl-GKEQLVMNSYARALEAIPRSLATNSGFDSIDVLNRLRQKHSqntedcsnY 482 Cryptosporidium ho...
AAG18498  396 KKAqRIVGGGGAIEMVISKHLHEIALKMd-GKAQLIVEAFGDALEAIPRSLTNNAGFDSFETLNKLRSAHEkad--gvwA 472 Trichomonas vaginalis
NP_473202 402 ITNsEIVPGAGSIEMQLSKYLRIYSRSIc-NKEQIVLFSFAKALESIPRHLSHNAGYDSTDILNKLRKKHSeqts-diwY 479 Plasmodium falcipa...
EAN77071  398 YRTgSVVGGGGAVEMELSKVLREYSRTIr-GKGQMVISGFARALEVIPRQLAENAGHDSTDSLNKLRQKHHasdqsgkwY 476 Trypanosoma brucei
Feature 1                                                        
XP_756712 486 GIDIdae-dtADLMEKFVWEPSLVRINALQSAAEAACLILSVDETIRNQAS 535 Ustilago maydis 521
XP_635173 476 GVDIvne-giCDTYESAIWEPSLVKLNSIVAATEATCLILSVDETVQNNQA 525 Dictyostelium discoideum AX4
CAH03492  482 GVDIngasgvCDTHSSFVWEPSLVKRNALCSATEAACAILSIDETVKNPKS 532 Paramecium tetraurelia
EAL51822  472 GVNVnee-giLDMMEAQVWEPALIKLNAIAAATEAASLIISIDETIKAPEH 521 Entamoeba histolytica HM-1:IMSS
XP_330350 479 GVDFtne-gvCDMMERFVWEPALIKINALQAATEAACLILGVDETIRNEES 528 Neurospora crassa
BAB83929  481 GVDCing-giCDAYAACIWEPSLVKRNAIYSATEAACLVLSIDETIKQQNS 530 Babesia microti
XP_665218 483 GVDCsng-giCDTFNSFIWEPAVNKLSAYSSATEAACSILSIDETVKNKSS 532 Cryptosporidium hominis
AAG18498  473 GVDIetg-gvLNAVENFIWEPLVVKKNALKAACEAACTILSVDETVQIPQH 522 Trichomonas vaginalis
NP_473202 480 GVDCmeg-diINAYDNCIFEVTKIKRNVIYSATEAACLILSIDETIKNPSS 529 Plasmodium falciparum 3D7
EAN77071  477 GVDIlhg-gvCDTFERFVWEPTLVKRNAIQSATEAACLVLSVDETVTNPES 526 Trypanosoma brucei

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