Conserved Protein Domain Family
PHEMX_like_LEL

?
cd03153: PHEMX_like_LEL 
Tetraspanin, extracellular domain or large extracellular loop (LEL), PHEMX_like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". Phemx (pan hematopoietic expression) or TSSC6 may play a role in hematopoietic cell function.
Statistics
?
PSSM-Id: 239406
Aligned: 7 rows
Threshold Bit Score: 120.708
Created: 4-Nov-2005
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
 
dimer interface
Feature 1:dimer interface [polypeptide binding site]
Evidence:
  • Comment:dimeric assembly observed in the CD81 crystal is predicted to resemble quaternary structure of intact CD81 at the cell surface

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1       #    #   # ##  #                    #  ##  ##                                  
XP_540788  113 FHNPTQVEDAVLDTYDLVYDQAVkn-----vsGTPQQQLVAIQDTFLCCGKNSPFSLLgDLEVSLCQGEEAAr-----qD 182  dog
AAK84430   113 FYNPTQVEDAVLDTYDFVYDQAMks-----psSNWWQELAVIQDTFLCCGKKSPFGLLvSTGAIMCQGREAMr-----eD 182  house mouse
AAG15841    81 LHSPTQVEDAMLDTYDLVYEQAMkg-----tsHVRRQELAAIQDVFLCCGKKSPFSRLgSTEADLCQGEEAAr-----eD 150  human
BAC56943    52 YVHSTEVEDSMLDVYDLVYEEVRrn-----gsSSKRHELTLIHEVFQCCGKHSPLGDTaAVQHTMCHPGTAWaa---gqD 123  chicken
CAB94722    44 LGAALSTIATVREAHGLMAAGFLcfalsfcilVQVAFWRFYNPTQFLCCGKKSPFGLLvSTGAIMCQGREAMrevyammL 123  house mouse
XP_508222  411 QTTGFGVEDAMLDTYDLVYEQAMkg-----tsHVRRQELAAIQDVFLCCGKRSPFSRLgSTEADLCQGEEAArevsallL 485  chimpanzee
XP_608981  113 AHSPTQMEDAVLDAYDRAYERALrs-----asGSGRQELVAIQDTDCLRGIQSFLRVHgNIVSTLIGLGLAFtvy-amlL 186  cow
Feature 1                   
XP_540788  183 CLVGIRSFLRMYG 195  dog
AAK84430   183 CLQSIRNVLWTHY 195  house mouse
AAG15841   151 CLQGIRSFLRTHQ 163  human
BAC56943   124 CLQEIHGFLKKHM 136  chicken
CAB94722   124 CAFLWFAIHSYHG 136  house mouse
XP_508222  486 SSFLWFAIRCGCS 498  chimpanzee
XP_608981  187 SSFIWFTIRLGRY 199  cow

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap