1B9Y,1A0R,1B9X,2TRC


Conserved Protein Domain Family
Phd_like_Phd

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cd02987: Phd_like_Phd 
Click on image for an interactive view with Cn3D
Phosducin (Phd)-like family, Phd subfamily; Phd is a cytosolic regulator of G protein functions. It specifically binds G protein betagamma (Gbg)-subunits with high affinity, resulting in the solubilization of Gbg from the plasma membrane. This impedes the formation of a functional G protein trimer (G protein alphabetagamma), thereby inhibiting G protein-mediated signal transduction. Phd also inhibits the GTPase activity of G protein alpha. Phd can be phosphorylated by protein kinase A and G protein-coupled receptor kinase 2, leading to its inactivation. Phd was originally isolated from the retina, where it is highly expressed and has been implicated to play an important role in light adaptation. It is also found in the pineal gland, liver, spleen, striated muscle and the brain. The C-terminal domain of Phd adopts a thioredoxin fold, but it does not contain a CXXC motif. Phd interacts with G protein beta mostly through the N-terminal helical domain.
Statistics
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PSSM-Id: 239285
Aligned: 20 rows
Threshold Bit Score: 120.474
Created: 31-Dec-2004
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
G protein beta
Conserved site includes 20 residues -Click on image for an interactive view with Cn3D
Feature 1:G protein beta interface [polypeptide binding site]
Evidence:
  • Structure:1B9YC, Rattus norvegicus Phosducin binds Transducin beta; contacts at 3.5A
    View structure with Cn3D
  • Comment:Most of the binding energy comes from the N-terminal helical domain of phosducin with a lesser contribution from the C-terminal TRX-like domain.
  • Citation:PMID 8898209

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1     #  ####  # ## #                                                                 
1B9Y_C     14 EGQATHTGPKGVINDWRKFKLEsedgdsippskkeilrqm----------------sspqsrddkdskermsrKMSIQEY 77  Norway rat
NP_648786  60 QQSSTNTGPKGVVKDWQRFKQLeaerrdeterqrlalakk----------------ltitattsaedeerkrqEELDAEL 123 fruit fly
EAA09227   71 TGTAGNTGPKGVIQDWQRFKQLeaerreqdemekvrllkk----------------lsitartkeedkaaeamNELDAEF 134 Anopheles gambiae ...
NP_955941  52 DGSSVNTGPKGVINDWRKYKQLeneqrieqqkemeklikklsmtckshleeeadkqkqkelqdkltgklnlrvDEEEEED 131 zebrafish
EAK83035   91 EEGATNTGPKGVLRDRQLRAQQesaarsaaihatnrkmesia-----------itaesyseqiarqkreqaavLERENMD 159 Ustilago maydis 521
NP_502574  43 MGPSSNTGAKGVLNEFKAFREQtrlavesknqklie------------------------qakkgmmigskeeREKAQRE 98  nematode
AAW27800   50 HPGYPQTGPKGVVADYKHFKKLqserdaeeeqkiieyakqh-------------slscrpysedvkacektihTSESSND 116 Schistosoma japonicum
EAA52508   79 FDSGRATGVKGVIADARSYETAkqakwksrvrqarrsvl-----------------gmggllnsgattdksesGGSADEH 141 Magnaporthe grisea...
CAF05967   83 FDAGAATGVKGVIADARAYENAkrsakwknrvrsarrsvfggggda---speqqksgsrkysdgagssgldsdFGSDAGL 159 Neurospora crassa
AAW41191   87 EHDGHQTGVKGVIDDRKVHNSNaaaqkqaeataraielqr---------------kalvgltvheeaelvakdKEEKEED 151 Cryptococcus neofo...
Feature 1                      #   #                                                          
1B9Y_C     78 ELIHQdke-degCLRKYRRQCMQdmhqk-------------------------lsfgPRYGFVYELETgEQFLETIEKEq 131 Norway rat
NP_648786 124 DELMSe-----dFLQQYQKQRMAemlrq-------------------------tghhQQFGQVQQLTShEEFLACVEQEn 173 fruit fly
EAA09227  135 QELMDe-----dFLLEYQRKRMAemlam-------------------------mdkkGCFGELIHLKDgGEFLQAVDKEd 184 Anopheles gambiae ...
NP_955941 132 DDDEA-------FLQQYRLQRMEqmrrq-------------------------lcggRRFEKVMDISSgEEFLRAVDEEg 179 zebrafish
EAK83035  160 SDDDEtasqaaiADLQAKERRREmriaelktfhaaknnalvsgtihaptrpasaptdRYFGHLRQVDE-RGYVSAIDNEd 238 Ustilago maydis 521
NP_502574  99 DDEDEdf---emTLEGLKAKRLRem------------------------------rkIAANRVIEMTDkKQYSDAVDGSs 145 nematode
AAW27800  117 DSDDE-------FLTQYRQNRINelrka-------------------------mdylPTFNKIYDLVA-DTFIEEVDNTs 163 Schistosoma japonicum
EAA52508  142 DDDADg-----eFLQQWRESRRReleaea----------------------qsgpaiRNRRTSPSVRM-FGRFDEVDALg 193 Magnaporthe grisea...
CAF05967  160 DSMDEde---keFLERWRESRRRelekssmnpa--------------srqrrtspssRQFGRLDNVDA-IGYLDAIEKVg 221 Neurospora crassa
AAW41191  152 SELEEwrk--krRDQLQREKTMQqeddsqwerqrqg---------dfaygggdvgkgIRRGALREISE-HNFIESVEREg 219 Cryptococcus neofo...
Feature 1                                                                                     
1B9Y_C    132 kv---------ttIVVNIYEDGVRGCDALNSSLECLAAE---YPMVKFCKIRAsnt---------------gaGDRFSSd 184 Norway rat
NP_648786 174 kh---------ttIIIHIYERQLAACATLNKCLDSLASD---YPSIKFAKICSsva---------------gmSRDFRTk 226 fruit fly
EAA09227  185 kn---------atVVIHIYREKYDPCIKMNEALSKLAKE---YTNVKFCKFISsda---------------glSNLFKTs 237 Anopheles gambiae ...
NP_955941 180 ks---------tlVLVHIYEPEVPACQAMDGSLLCLALQ---YPMVKFCRVRGsav---------------gtSALFRSs 232 zebrafish
EAK83035  239 ar---------vpVVIHIYSKAVAQCNVLTSSLASLARQ---YPHTKFLQVQAaaigfgr-------nadddqDEEFDEf 299 Ustilago maydis 521
NP_502574 146 s----------ylLCVLIYEPESDECEYLTRIVKILAAD---CPKTKFVRATStll---------------emSRAFRTn 197 nematode
AAW27800  164 kd---------ttVIVFIYENGNKSCAKVNTCLEKIFQN---YPHVKFCRIRAsma---------------hlSYRFSHh 216 Schistosoma japonicum
EAA52508  194 yldaiekvgrdtvVAVFVYDHECEVSAEVEAALRPLVTA---YPAVHFVKVHYd-------------------DIEFDNa 251 Magnaporthe grisea...
CAF05967  222 pe---------taVVVFVYDHECPVSAAIEIALRPIVHS---HPAIHFIKVHYa-------------------EMEFDNa 270 Neurospora crassa
AAW41191  220 ------------wAIVLIYEPGIPRCNALSASLLHLSLNlpaSLSVALYRARAsaiafsllpassstttslviDDEFQVk 287 Cryptococcus neofo...
Feature 1                           #   #####                        ###
1B9Y_C    185 --------------VLPTLLVYKG-GELISNFISVAEQFAe--DFFAADVESFLNEYG 225 Norway rat
NP_648786 227 --------------GLPALLVYKA-QAVIGNFVRLTDDLSd--DFFASDVESFLIEHG 267 fruit fly
EAA09227  238 --------------GVPALLIYKG-GQMIGNFVKLVDDLSd--EFDFADVESFLVENG 278 Anopheles gambiae str. PEST
NP_955941 233 --------------ALPALLLYRG-GDLVGNLRLPQRNELp--SFPAYVLHNACPSSF 273 zebrafish
EAK83035  300 nsk--------tleVLPTVLVYKA-GKLVANLVRVDLDPMw-nKGSEQDLRDLLDAYG 347 Ustilago maydis 521
NP_502574 198 --------------GVPCLQFYSN-GNLIGNFVKISAILGq--DYDCKKLTKFLRGQH 238 nematode
AAW27800  217 --------------GVPAIVVYKN-GELIGNLLSITKDLGd--EFYPNDLDNYLVEHG 257 Schistosoma japonicum
EAA52508  252 --------------AVPAILAYRNqGDLIANLTGIIEMIPeneDFDSESLKKIFKKHN 295 Magnaporthe grisea 70-15
CAF05967  271 --------------AVPSILAYRNqGDLFANLTGLIEMIPddeDFDTDTLKRLFERHG 314 Neurospora crassa
AAW41191  288 evedkepkrlpdpdVLPSLLAYKD-GELEKTWIRVDWDVSe--DGIEGLLRREGVLPT 342 Cryptococcus neoformans var. neoformans ...

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