1KMM,1ADJ,1QE0


Conserved Protein Domain Family
HisRS-like_core

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cd00773: HisRS-like_core 
Click on image for an interactive view with Cn3D
Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain. HisRS is a homodimer. It is responsible for the attachment of histidine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs. This domain is also found at the C-terminus of eukaryotic GCN2 protein kinase and at the N-terminus of the ATP phosphoribosyltransferase accessory subunit, HisZ. HisZ along with HisG catalyze the first reaction in histidine biosynthesis. HisZ is found only in a subset of bacteria and differs from HisRS in lacking a C-terminal anti-codon binding domain.
Statistics
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PSSM-Id: 238396
Aligned: 59 rows
Threshold Bit Score: 157.379
Created: 24-Sep-2002
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 17 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:
  • Structure:1KMM_C, E. coli HisRS complexed with Histidyl-adenylate using 3.5A
    View structure with Cn3D

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                        # #            
1KMM_C       18 ETAIWQRIEGTLKNVLGSYgYSEIRLPIVEQtplfkraigevtdvvekeMYTFEDRnGDSLTLRPEGTAGCVRAGIEHgl 97  Escherichia coli
P74592       16 EVAQKARINDQLQQTFHRWgYQRIVTSTLEWldtlvag----gaisannVIQLQDSgEGRLGLRPELTASIARAVVTRmt 91  Synechocystis sp...
NP_680972    16 DVARQRWLEQRLERVFQSWgYQEIITPTIETlatltag----gtvhpetVIQVQGSgDEPLGLRPELTASIARAAVTRma 91  Thermosynechococ...
NP_721648    17 RARVMYEIERDISNLLIKQgFNRIETPTLEHfevfad-------dvsseHYHLFDKkGNLLSLRPDITSQIGRVIASTrv 89  Streptococcus mu...
NP_785988    17 RARTKQHLIAVIQAHFKQRgLAPIATPLLENeavfdpy-----qmgnyqLYRLFGNdGRTLVLRPDMTLPVARFISATnv 91  Lactobacillus pl...
Q9RUE3       39 EWERREHLRSHLSALLRSWgYRGVDLPALELadpah--------pqgnhAFKLIDSgGQVLALRSEYTTALGRLVGTHfp 110 Deinococcus radi...
O34459       17 LYETKKKVRRSLTDLIDKWgYQFMETPTLEFydtvgvq----saieeqqLFKLLDQdGKTLVLRPDMTGPIARVAASKll 92  Bacillus subtilis
Q97KI4       19 ECTIKNNIENILRNSYINVgYEEVRSPTLEFydvynlen---qpisqekMYKLFDNtGRILVLRPDMTTPIARICATKlk 95  Clostridium acet...
ZP_00103827  21 ELALQERAEASALDLFKAWaYQKVVTPTLEYgaciqpv-----eeeedsFFKLFDRqGHVLVLRPELTTPIARMVSTRmr 95  Desulfitobacteri...
Q92E82       18 EARASYQIEQQVNHYFAKRgFKRIETPVIEFedvfsse-----hqadakLYRFFDEkGRLTVLRPDMTLPIGRVVSTTgv 92  Listeria innocua
Feature 1                      # #       #  # #   #                                             
1KMM_C       98 lynqEQRLWYIGPMFRHERpq-kgRYRQFHQLGCEVFGlqGPDIDAELIMLTARWWRalgiseHVTLELNSIg------- 169 Escherichia coli
P74592       92 d-nqPQRLCYRANVFRNPPegyhgKQMEFFQAGIELLFagGVRADAEILLLLTDCLTqlg-lsDWQLILGDAgltr---s 166 Synechocystis sp...
NP_680972    92 gmqlPQRLYYKTNVFRRTTgaelgNQQEFFQAGVELLGatGLAADAEILWLVQECLGvla-vgEAYLLVGDAhltq---q 167 Thermosynechococ...
NP_721648    90 --etPIKFSYSGKVFKYNEel-rgLANEHTQAGIEIVGykTQDAIKDALLSAKDALKasg-lkDYKFEFSHAhilqt-if 164 Streptococcus mu...
NP_785988    92 --plPQKFGYVGDIFRVSRql-sgSYNQITQAGVELVGyaSLKAEFECLTIANQLSSeli-adAVEIELGDAqfaqrvva 167 Lactobacillus pl...
Q9RUE3      111 sgpfPLRLQYGGRLWLRTQtselgRLREFNQVGAELIGvtGVQADAELLALAHAALGqa--gvQAQLEVGFPgfvda-al 187 Deinococcus radi...
O34459       93 khghPLRVGYAANVFRAQEre-ggRPAEFEQVGVELIGdgTTSADAEVIALVVGALKnag-laSFKIAIGHAgiadalfv 170 Bacillus subtilis
Q97KI4       96 nrvyPLKLSYTGNIYRMNKal-ngKISEITQSGIEILGfsSLKADAEVIITAIKAILktg-lkNFKIEIGQVeffks-ii 172 Clostridium acet...
ZP_00103827  96 gttfPLRLCYAADVFRYSKs----HKQEFRQVGVELIGsaSPAADAEVVALAIEALRqig-gmDFQINLGHMgiftg-im 169 Desulfitobacteri...
Q92E82       93 --tlPLKLSYSGKIFRANEdf-ggEQNEQTQAGIEIIGypSIKAEIECILSGIGVLNale-ipNFQIELGHAaiyrr-vi 167 Listeria innocua
Feature 1                                                                                       
1KMM_C      170 -sLEARANYRDALVAFLEQhkekldedckrrmytnplrvld-------sknpevqallndapalgdyldeESREHFAGLC 241 Escherichia coli
P74592      167 llAKLPPTLQATVRDCITRldyvelsqlpypdneaknlalqlf----dlrgtveevlarlgkldlqgeclGLVDRLQALL 242 Synechocystis sp...
NP_680972   168 llGTFPAELQKTVRQCLANldrvslqalpapwrdralalf----------dlrgtpeevgerlaqwsdvaGVVDRFAQLQ 237 Thermosynechococ...
NP_721648   165 anLDIPETAKKELTTFIQDknitglnefthrypsefnalirq------lpflfgeshqvlkkarqltnhqTILSALTDLE 238 Streptococcus mu...
NP_785988   168 slTGDEGEQQAILTALFDKqvprytkliakyraqplydflkaw---prlfgrpecifkelaaaplpetvqPSLKRLQTVV 244 Lactobacillus pl...
Q9RUE3      188 tdAGLPGPVRAALHDAIDRksgadldllarqhgvspevtrtlhs--ltelyggpevltearvlargvraeQAVEHLSAVH 265 Deinococcus radi...
O34459      171 evLGNVERADVLRRFLYEKnyvgyrehvkslplssidksrlle---llelrggievcgraeeivdsaqgkSVVDELKALW 247 Bacillus subtilis
Q97KI4      173 sdTALKEQDTEKLRNFIENknfskveefilrnsdligetsskvlmnlpnlfggkeviekaeqltsnkqaiEALKKVRDLY 252 Clostridium acet...
ZP_00103827 170 aeLGVPQEFQLHYQEKLARkdfvgierlvkdygfelkvqdvllk--lphlhgqedmldqvlewsrrpsllEAVAALRQVY 247 Desulfitobacteri...
Q92E82      168 hlLNLPETAEMDFRLLIQNksltgiqqfvtenpstlddfilal---prlfgpattilkqaknlttdkgilTALTEMETIV 244 Listeria innocua
Feature 1                           # # ##                #    #                    #  #        
1KMM_C      242 KLLESag---iaYTVNQRLVRGLDYYNRTVFEWVTNslgsqGTVCAGGRYDglveq--lggraTPAVGFAMGl------- 309 Escherichia coli
P74592      243 CLVAAsgdgpanLVLDLSWLQPFDYYTGMVFQAVSRqadncYVLGQGGRYDqllsqyhpqqqsFPGTGFSLNi------- 315 Synechocystis sp...
NP_680972   238 QLLALvae-slaITLDLSLVQSFDYYTGIIFEVLIPtetelRLVAQGGRYDqllsiyhpdgatVPGIGFVFNv------- 309 Thermosynechococ...
NP_721648   239 DLLQElavslaeITLDLAQIASMPYYTGLMFKVFGDki--pDAFVSGGRYDklfer--fgakeLTAIGWALDi------- 307 Streptococcus mu...
NP_785988   245 AWMQQtmp-eqvISVDLSSQAPQKYYTGLTFRGYSQag--aGYLFSGGRYDklltn--fqaeaEPAVGMGLNv------- 312 Lactobacillus pl...
Q9RUE3      266 AAAQEag---veLLFDLGVSRRYGYYTGLTFRAYVDgi--nQPVLGGGRYAlp--------ggLPGAGFAIGl------- 325 Deinococcus radi...
O34459      248 DILEDygc-tenVRLDLNMVSHMSYYTGILFEVYAEnv--gFVIGSGGRYNkllgh---fdspAPATGFGLRi------- 314 Bacillus subtilis
Q97KI4      253 DIVKRagf-geyILIDLGMVQHINYYTGLIFRGYAHgi--gDDLLSGGRYDkllgq---fgydIPATGLAINv------- 319 Clostridium acet...
ZP_00103827 248 RYLKDfgv-qdyVSLDLGILRGFSYYTGAVFEGYVPgv--gFPVVEGGRYDalyge---fgedVPATGFAINl------- 314 Desulfitobacteri...
Q92E82      245 DAVSYaa----dISVDLGLVQDFHYYTGIIFRGYADla--aDNFLSGGRYDhlleq--ftsssSPAVGLALNldslttlq 316 Listeria innocua
Feature 1        #      
1KMM_C      310 eRLVLLVQ 317 Escherichia coli
P74592      316 eELHQCLL 323 Synechocystis sp. PCC 6803
NP_680972   310 eALLQAVA 317 Thermosynechococcus elongatus BP-1
NP_721648   308 dSVYQAIH 315 Streptococcus mutans UA159
NP_785988   313 -DLLTTLA 319 Lactobacillus plantarum WCFS1
Q9RUE3      326 eRLAAVMP 333 Deinococcus radiodurans
O34459      315 dRLIEALH 322 Bacillus subtilis
Q97KI4      320 dNLVAALD 327 Clostridium acetobutylicum
ZP_00103827 315 kAIIEQMA 322 Desulfitobacterium hafniense
Q92E82      317 nRAGIIKK 324 Listeria innocua

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