Conserved Protein Domain Family
rnc

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PRK00102: rnc (this model, PSSM-Id:234633 is obsolete)
ribonuclease III; Reviewed
Statistics
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PSSM-Id: 234633
Aligned: 602 rows
Threshold Bit Score: 219.212
Created: 9-Dec-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
16271989    1 MNH-LDRLERKIGYRFNDiALLKQALTHRSA-----ATQHNERLEFLGDSILNFTIAEALYHQFPRCNEGELSRMRATLV 74 
119025240   1 --MtANVLLEALGTTIEP-DLLVEALTHRSFsheheGAKNYERLEFLGDAVLELVSTETLYKVHPDMNEGQLAKMRAKAV 77 
283455260  64 GEMtANVLLEALGTTLAP-ELLVEALTHRSFshehpGAKNYERLEFLGDAVLELVSTETLYAAHPDMTEGQLAKMRAKAV 142
219682760  11 geSaMQELFTALGTTLET-DLLVEALTHRSFsheheGVKNYERLEFLGDAVLEFVVTETLFKQYPDKSEGQLAKIRAKAV 89 
241195742  11 geSaMQELFTALGTTLET-DLLVEALTHRSFsheheGVKNYERLEFLGDAVLEFVVTETLFKQYPDKSEGQLAKIRAKAV 89 
241190336  11 geSaMQELFTALGTTLET-DLLVEALTHRSFsheheGVKNYERLEFLGDAVLEFVVTETLFKQYPDKSEGQLAKIRAKAV 89 
189439904   8 qptpaNELLEALGTTLSP-DLLVQALTHRSFshehpGVANYERLEFLGDAVLELVSTETLFTIHPDMTEGQLAKMRAKAV 86 
23464896   43 qptpaNELLEALGTTLSP-DLLVQALTHRSFshehpGVANYERLEFLGDAVLELVSTETLFTIHPDMTEGQLAKMRAKAV 121
28493529    1 MDGvDELLLRKFNLTLPP-GLLRTAFVHKSFsfengACQNNERLEFLGDAVLGLVVSHYLFETCPEYTEGQLSAARSYIV 79 
283782836  10 pgdptqeLLNALGTTISP-DLLVEALTHRSFshehpGTRNYERLEFLGDAVLELVSTETLFSAHPDMTEGQLAKMRAKAV 88 
16271989   75 REPTLAILARQF-ELGDYMSLGSGELKNGGFRRESILADCVEAIIGAMSLDQGLAVTTQVIRNWYQQLLAEIKPGDNQKD 153
119025240  78 SEESLSKIAREKlHVGPYILLGHGEAEQGGADKSSILCDIVESLIGATFIQHGIDEARRVVHHLVDDTLAEVATEGPALD 157
283455260 143 SEESLSHIAREKlHVGPYILLGNGEAEQHGAEKSSILCDIVESLIGATFIQHGIDEARKVVHHLVDDTLAEVATEGPALD 222
219682760  90 SEESLSAIARDRlHVGPYILLGHGESEQGGAEKSSILCDIVESLIGATFVQYGVDKAREVVHHLVDDTLAEVATEGPALD 169
241195742  90 SEESLSAIARDRlHVGPYILLGHGESEQGGAEKSSILCDIVESLIGATFVQYGVDKAREVVHHLVDDTLAEVATEGPALD 169
241190336  90 SEESLSAIARDRlHVGPYILLGHGESEQGGAEKSSILCDIVESLIGATFVQYGVDKAREVVHHLVDDTLAEVATEGPALD 169
189439904  87 SEDALSAIAKTKlKVGPYILLGHGEAEQGGAEKNSILCDIVESLIGATFLEHGIDEARKVIHRLIDDTLAEVATEGPALD 166
23464896  122 SEDALSAIAKTKlKVGPYILLGHGEAEQGGAEKNSILCDIVESLIGATFLEHGIDEARKVIHRLIDDTLAEVATEGPALD 201
28493529   80 SGTSIAQIAKEL-NLGQFMLLGKGEKLAGGMDKTSLLADLLESLIGAVMVDQGFESARDFVLALVGEKLRQVGE-FSVDD 157
283782836  89 SEWALSAVAREKlHVGAYILLGRGEMEQGGNNKDSILCDIVEALIGATFVEHGIDEARRVVHRLIDDTLAEVLTEGPALD 168
16271989  154 AKTRLQEYLQGKHLPLPTYEVVNIQGEAHCQIFTVKCKVKsaekIDRTFVAKGSSRRKAEQAAAEQILKELDI 226
119025240 158 WKTSLTVKAHEMGLPDPHY-QTSVAGPEYALEFTARAILGd--gGEVIGVGTGSSKRKAQLAAAEMGWKALDS 227
283455260 223 WKTSLTVKAHDMGLGEPYY-RMSVSGPEYAQVFTAKAMLEg--sDEVIGIGKGSSKRKAQLAAAEAGWKALDN 292
219682760 170 WKTSLTVKAHEMGLPEPRY-QMSVGGPEYALEFTAFAMLGd--sKEVLGVGNGSSKRKAQLAAAEQAWHVLDE 239
241195742 170 WKTSLTVKAHEMGLPEPRY-QMSVGGPEYALEFTAFAMLGd--sKEVLGVGNGSSKRKAQLAAAEQAWHVLDE 239
241190336 170 WKTSLTVKAHEMGLPEPRY-QMSVGGPEYALEFTAFAMLGd--sKEVLGVGNGSSKRKAQLAAAEQAWHVLDE 239
189439904 167 WKTSLTVKAHGLGKEEPVY-HMEVSGPEYAQIFTARVSLGe--nGDIIGIGKGSSKRKAQLAAAEAGWKSLDS 236
23464896  202 WKTSLTVKAHGLGKEEPVY-HMEVSGPEYAQIFTARVSLGe--nGDIIGIGKGSSKRKAQLAAAEAGWKSLDS 271
28493529  158 PKTKLQKLTRTQ----LVYEVVTE-GPPHSRTFKASVIVN-----EKRFFGQGSSKKQAQVAAAMSALASLEN 220
283782836 169 WKTSLTVKAHDMGLEDPEY-RMAVSGPEYAPVFEARAVLAhkdgDEVLGVGSGSSKRKAQLAAAEIAWHALDA 240
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