Conserved Protein Domain Family
HSH155

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COG5181: HSH155 
U2 snRNP spliceosome subunit [RNA processing and modification]
Statistics
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PSSM-Id: 227508
Aligned: 3 rows
Threshold Bit Score: 1475.19
Created: 7-Oct-2002
Updated: 23-Jan-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
19924243   55 SSNPkEEYDSAIDVRNDISQDEDDYKRTNDVNDSyrlVRQYEAPKELLNEyadeSYDPMQERQSKKQIQDRESDYQKQRY 134  fission yeast
19074890    1 ------MEDKGEDSRRSTKKASVWDEDRNASRGN---VSRWEVTPRTATQ----SKRLKWDQTPLGYIRVEDDLWSGTRM 67   Encephalitozoon c...
1730609     1 MSHP-IQFVNANNS-DKSHQLGGQYSIPQDLREN----LQKEAARIGENE-----KDVLQEKMETRTVQNREDSYHKRRF 69   baker's yeast
19924243  135 DRQltptrvdaFQPDgtqsngrsyaevmrqvelekeerrvhmelnqrrregtlkeveeeesiSDKKRELELNNTEISQKP 214  fission yeast
19074890   68 DPG---------------------------------------------------------------------AIWDMEYR 78   Encephalitozoon c...
1730609    70 DMK--------FEPD-----------------------------------------------SDTQTVTSSENTQDAVVP 94   baker's yeast
19924243  215 KRsrwdqappsvtqvsttKRRSRWDkapenftisehviengisedlinkevnvveeklrppvrllteeelnellpSEGYa 294  fission yeast
19074890   79 DS----------------MRSAEYS--------------------------------------------------EMSL- 91   Encephalitozoon c...
1730609    95 R-----------------KRKSRWD--------------------------------------------------VKGY- 106  baker's yeast
19924243  295 ilEPPpgylesihpellqkgttldtyhvpQEQELPLEKELPAALpTEIPGVGDLAFFKQEDVKYFGKLLKVEDEAKLTIA 374  fission yeast
19074890   92 ----R-------------------------EINMCLPARGYKRY--DFHGYAGNGELSVEDLPDVADDEKDFFMPLLEDR 140  Encephalitozoon c...
1730609   107 --EPP------------------------DESSTAVKENSDSAL-VNVEGIHDLMFFKPSDHKYFADVISKKPIDELNKD 159  baker's yeast
19924243  375 ELRERKILRLLLKVKNGTPPMRKSALRQLTDQARDFGAAALFNQILPLLMERTLEDQERHLLVKVIDRILYKLDDLVRPF 454  fission yeast
19074890  141 GGDEVDVYRGILLVKNGGKRMRMEGLRILRKKEVNR----VLEKVLLMAMSLELDDKGKEKVVGLLLSLLDGVDMGKVRY 216  Encephalitozoon c...
1730609   160 EKKERTLSMLLLKIKNGNTASRRTSMRILTDKAVTFGPEMIFNRLLPILLDRSLEDQERHLMIKTIDRVLYQLGDLTKPY 239  baker's yeast
19924243  455 THKILVVIEPLLIDEDYYARAEGREIISNLAKASGLAHMIATMRPDIDHVDEYVRNTTARAFSVVASALGVPALLPFLKA 534  fission yeast
19074890  217 VKEILFVVGSYSYFPSLKRMCMP---VLTLVYRCGFGFSVSSIEGDFTSKEPYVREVVGSVVGTFIDHFRMEEVNSLLES 293  Encephalitozoon c...
1730609   240 VHKILVVAAPLLIDEDPMVRSTGQEIITNLSTVAGLKTILTVMRPDIENEDEYVRNVTSRAAAVVAKALGVNQLLPFINA 319  baker's yeast
19924243  535 VCRSKKSWQARHTGVRIIQQIALLLGCSILPHLKNLVDCIGHGLEDEQQKVRIMTALSLSALAEAATPYGIEAFDSVLKP 614  fission yeast
19074890  294 LAGSR-SSEGRRTCIRCATKICEFSGRSRMSYVGPVLKILSKLVKDRSRFIRMDAANAMSYVFKLVGPLRTGQMDEIFCL 372  Encephalitozoon c...
1730609   320 ACHSRKSWKARHTGIKIVQQIGILLGIGVLNHLTGLMSCIKDCLMDDHVPVRIVTAHTLSTLAENSYPYGIEVFNVVLEP 399  baker's yeast
19924243  615 LWSGVQRHRGKSLAAFLKATGFIIPLMEPEYASHFTRRIMKILLREFNSPDEEMKKIVLKVVSQCASTDGVTPEYLRTDV 694  fission yeast
19074890  373 LKEEASQSGSIEFVSLLNAM-------S--YLCHDSREHSEVVFSLLKTSKEKGIPDLKVFERICDKVGTDDAWKYFDQV 443  Encephalitozoon c...
1730609   400 LWKGIRSHRGKVLSSFLKAVGSMIPLMDPEYAGYYTTEAMRIIRREFDSPDDEMKKTILLVLQKCSAVESITPKFLREEI 479  baker's yeast
19924243  695 LPEFFHCFWSRRMASDRRSYKQVVETTVVLAQQVGSRQIVERVVNNFKDESEPYRKMTAETVDKVIGSLGVSEIDERLEE 774  fission yeast
19074890  444 SCILFSPKGRE-SAG---------LASSICAKMGSDPRVSRKILEYYSDPP------NAGLASRIFSRIPRLGFGESEVE 507  Encephalitozoon c...
1730609   480 APEFFQKFWVRRVALDRPLNKVVTYTTVTLAKKLGCSYTIDKLLTPLRDEAEPFRTMAVHAVTRTVNLLGTADLDERLET 559  baker's yeast
19924243  775 LLLDGVLFAFQEQSVEEKVILTCFSTVVNALGTRCKPYLPQIVSTILYRLNNKSANVREQAADLVSSITIVLKACGEEAL 854  fission yeast
19074890  508 RYYRSICNALAHDDTTVGLVLP-----LVSKEFLGQKHTSMLISESLKLLRSPPPDARIRGLKTMGSLAKILS----TKE 578  Encephalitozoon c...
1730609   560 RLIDALLIAFQEQTNSDSIIFKGFGAVTVSLDIRMKPFLAPIVSTILNHLKHKTPLVRQHAADLCAILIPVIKNCHEFEM 639  baker's yeast
19924243  855 MRKLGVVLYEYLGEEYPEVLGSILGAIKAIVSVVGMSSMQPPIRDLLPRLTPILRNRHEKVQENTIDLVGKIADRGSE-- 932  fission yeast
19074890  579 LAYCGNILMENIDGDDQETLPFVLKAICSIYNSHRFR----PASGIIPSILPILKSKEQKIVASGVALLHTICMNSPEec 654  Encephalitozoon c...
1730609   640 LNKLNIILYESLGEVYPEVLGSIINAMYCITSVMDLDKLQPPINQILPTLTPILRNKHRKVEVNTIKFVGLIGKLAPT-- 717  baker's yeast
19924243  933 -YVSAREWMRICFELIDMLKAHKKSIRRAAVNTFGYISKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCMPFT 1011 fission yeast
19074890  655 eKIGVREWMRISYGLVDSLVSWNKEMRRNATESLGCISRIVGPQEILDILMDGLESEDRHQRTGSSLGISVVGEYNGLFS 734  Encephalitozoon c...
1730609   718 -YAPPKEWMRICFELLELLKSTNKEIRRSANATFGFIAEAIGPHDVLVALLNNLKVQERQLRVCTAVAIGIVAKVCGPYN 796  baker's yeast
19924243 1012 VVPALMADYRTPEMNVQNGVLKSLAFMFEYIGEQARDYVYAITPLLADALMDRDAVHRQTAASVIKHLSLG-CVGLGVED 1090 fission yeast
19074890  735 VLPTLLSDYETPNAFVQQGILRAMCHFFQRTHQASLKYVHSMLPMIEDAMTDEDPSYRSLGMNLIRHIVLNhPPATMDIE 814  Encephalitozoon c...
1730609   797 VLPVIMNEYTTPETNVQNGVLKAMSFMFEYIGNMSKDYIYFITPLLEDALTDRDLVHRQTASNVITHLALN-CSGTGHED 875  baker's yeast
19924243 1091 AMIHLLNILWPNILEESPHVINAVREGIDGIRNCIGVGPIMAYLVQGLFHPSRKVRNTYWTSYNSAYVQSADAMVPYYPH 1170 fission yeast
19074890  815 LAIHLLNLIWANILDPIPTVQQSFDECMESFATVLSSQAMYKYVQQGLFHPSSTVRKRYCTVLEIMEHFDSTTLSQCLSV 894  Encephalitozoon c...
1730609   876 AFIHLMNLLIPNIFETSPHAIMRILEGLEALSQALGPGLFMNYIWAGLFHPAKNVRKAFWRVYNNMYVMYQDAMVPFYPV 955  baker's yeast
19924243 1171 VDDDqfNNYDMKTLHICI 1188 fission yeast
19074890  895 EEEL---PELAR------ 903  Encephalitozoon cuniculi
1730609   956 TPDN--NEEYIEELDLVL 971  baker's yeast
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