Conserved Protein Domain Family
BDP1

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COG5118: BDP1 
Transcription initiation factor TFIIIB, Bdp1 subunit [Transcription]
Statistics
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PSSM-Id: 227448
Aligned: 3 rows
Threshold Bit Score: 700.313
Created: 7-Oct-2002
Updated: 23-Jan-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1174647   34 PQLFIPESKEIEEDNSDNDKGVDENETAIVEKpsLVGERSLEGFTLTGTNGHDNEIGDEGPIDASTQNPKADVIEDNVTL 113 baker's yeast
19173062     --------------------------------------------------------------------------------     Encephalitozoon cun...
19075996   1 MSRFAPKFTARREKVSDQKEVVHEEKNQPLTG--NEVETSAQLSRDTANADISSPVVQTVVHKEATENPTASSYRKDDSV 78  fission yeast
1174647  114 KPAPLQTHRDQKVPRSSRLASLSKDNeSRPSFKPSFLDSSSNSNGTARRLSTISNKLPKKIRLGSITENDMNLKTFKRHR 193 baker's yeast
19173062     --------------------------------------------------------------------------------     Encephalitozoon cun...
19075996  79 KQNEKLLHSNPTFKISKPTVLEQPLN-AIEHLSPETDLSSSAEQQFMKELDLFFDENIPLSQLSAVSDGKADSPATKKSR 157 fission yeast
1174647  194 VLGKPSSAKKPAgahrisivsKISPPTAMTDSLDRNeFSSETSTSREADENENYVISKVKDIPKKVRDGESAKYFIDEEN 273 baker's yeast
19173062     --------------------------------------------------------------------------------     Encephalitozoon cun...
19075996 158 RSYRESSLKRKS---------QLILENVGTDEKIIN-ISETKMSALCDDPGIGRKSQRFIELEKMLFEEKRAKRIKKQGA 227 fission yeast
1174647  274 FTMAELCKPNFPIgQISENFEKSKMAKKAKLEKRRHLRELRMRARQEFKPLHSLTKEEQEEEEEKRKEERDKLLNADIpe 353 baker's yeast
19173062   1 -------------------------------MRRRHVKFFEGSNTHRMDQKLKHFLDNSNFRQDRRSRKKKASASRDI-- 47  Encephalitozoon cun...
19075996 228 STASSSREASLDS-TIKQPLSASLLESSEPKEKEEIVGSLEEEGTDESASLEDSLSHPTKSILDQLADKMEVDGLNNN-- 304 fission yeast
1174647  354 SDRKAHTAIQLKLnpdGTMAIDEETMVVDRHKNASIENEYKEKVDENPFANLYNYGSYGRGSYTDPWTVEEMIKFYKALS 433 baker's yeast
19173062  48 ADQNQEEILMIKN---GHIVVNDANMYVDTHK-----VMEMEVMEDD---RIVTSSTFSKKKGALRWSKKEIELFYKALE 116 Encephalitozoon cun...
19075996 305 SNYSATPRTRVVN---GQIVLDETSLEVDRHERDFVPAEEREYVEENSLSRRVTSATWGNRQKPEKWNAMDTEKFYKALS 381 fission yeast
1174647  434 MWGTDFNLISQLYPYRSRKQVKAKFVNEEKKRPILIELALRSKLPPNFDEYCceikkniGTVADFNEKLIELQNEHKHHM 513 baker's yeast
19173062 117 ICGIEFSLISSLFPNKERKHIKAKYIKEAKVNPERINEVLNECKTFDQVAYN-------KLRSYLLE------------- 176 Encephalitozoon cun...
19075996 382 QWGTDFALIANMFPTRNRRQIKLKFKQEERRNPARVNQALKIKKPIDMEEYS-------KVSGKVFRPVEEMEKELQKIR 454 fission yeast
1174647  514 KEIEEAKNTAKEEDQTAQRLNDANLNKKGSGGIMTNDLKVYRKTEVVLGTIDD 566 baker's yeast
19173062     -----------------------------------------------------     Encephalitozoon cuniculi
19075996 455 ENFEEERRRAIEVAEQRQLIVNHELEQEKNAPSPTDDKSYVFEDGVEVVGQVV 507 fission yeast
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