Conserved Protein Domain Family
DD_CABYR_SP17

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cd12100: DD_CABYR_SP17 (this model, PSSM-Id:213047 is obsolete and has been replaced by 438521)
Dimerization/Docking domain of the sperm fibrous sheath proteins, Calcium-Binding tYrosine-phosphorylation Regulated protein and Sperm Protein 17
CABYR and SP17 are naturally located in human sperm fibrous sheath (FS). CABYR was originally isolated from spermatoza and was thought to be testis-specific, but has been recently been observed in lung and brain tumors. It is a polymorphic calcium binding protein that is phosphorylated during capacitation. SP17 plays an important role in the interaction of sperm with the zona pellucida during fertilization. It also promotes cell-cell adhesion. SP17 is found in various human tumors of unrelated histological origin including metastatic squamous cell carcinoma, multiple myeloma, ovarian cancer, primary nervous system tumors, among others. Both CABYR and SP17 contain an N-terminal dimerization/docking (D/D) domain with similarity to the D/D domain of the R subunit of cAMP-dependent protein kinase (PKA). The D/D domain of the R subunit dimerizes to form a four-helix bundle that serves as a docking site for A-kinase-anchoring proteins (AKAPs), which facilitates the localization of PKA to specific sites in the cell. The D/D domain of CABYR and SP17 have been shown to bind to AKAP3, a protein that is also associated to the FS of mammalian spermatozoa.
Statistics
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PSSM-Id: 213047
Aligned: 21 rows
Threshold Bit Score: 66.4901
Created: 29-May-2012
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative dimerputative AKAP
Feature 1:putative dimer interface [polypeptide binding site]
Evidence:
  • Comment:based on the dimer structures of mammalian RIalpha and RIIalpha D/D domains
  • Comment:The Dimerization/Docking (D/D) domain of R subunits dimerizes to form an X-type four-helix bundle .

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             #  ##  ##  ##  ## #### ##  ##  #   
O75952         10 VPYGLKTLLEGISRAVLKTNPSNINQFAAAYFQELTMYR 48   human
Q20199          9 VPHDLRPILEALAREVLRSQPSDVAEFGHMFFDEYLKHR 47   Caenorhabditis elegans
EGI58887       25 VPHGLATVVEGLTREVLRHRPEDIYVFAARHFEKLLKLR 63   Panamanian leafcutter ant
XP_001231469   12 LPSGFEEVLQGMAREVLRAQPDDVLGFITRYFQALLAER 50   chicken
NP_001184212   12 IPRGFANLLEGLTREVLRHQPKDIPLFGAENFAQLLQQR 50   African clawed frog
CBY38884       12 VPPGLPSALESLARAVLKEQPDDLPKFAAAHFQALLRQR 50   Oikopleura dioica
EHJ71040       15 MPPGLIELMDGLARDVLKNNPTDIYEFCSDHMKKLLQTR 53   monarch butterfly
XP_002126179   12 VPNGFSTLLECFATEVMREQPLDIVTFASRYFNQLLTER 50   Ciona intestinalis
NP_001073148   12 IPRGFGNLLEGLTREVLREQPEDIATFAAVYFTELLKAR 50   zebrafish
XP_003219696   10 VPYGLKTLLEGVSRAVLKASPPNITEFAAIYFRELILFR 48   green anole

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