2H8H,3FJ5,1QWE,1PRL


Conserved Protein Domain Family
SH3_Src

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cd12008: SH3_Src 
Click on image for an interactive view with Cn3D
Src homology 3 domain of Src Protein Tyrosine Kinase
Src (or c-Src) is a cytoplasmic (or non-receptor) PTK and is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells, and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies.
Statistics
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PSSM-Id: 212941
Aligned: 6 rows
Threshold Bit Score: 107.504
Created: 31-May-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
peptide ligandswapped dimer
Conserved site includes 15 residues -Click on image for an interactive view with Cn3D
Feature 1:peptide ligand binding site [polypeptide binding site]
Evidence:
  • Comment:SH3 domains typically bind proline-rich ligands, preferentially to PxxP motifs.
  • Structure:1PRL; Gallus gallus Src SH3 domain binds PLR1 ligand (afapplprr); contacts at 4A.
    View structure with Cn3D
  • Citation:PMID 1280858
  • Structure:1QWE; Avian sarcoma virus c-Src SH3 domain binds App12 ligand (applpprnrprl); contacts at 4A.
    View structure with Cn3D
  • Citation:PMID 7510218
  • Citation:PMID 7526465
  • Comment:flanking hinge and loops (RT and n-Src) confer sequence specificity for ligand residues outside the core binding motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          # #####  #               ####            # # ##    
2H8H_A     87 TFVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPS 142 human
3FJ5_A      2 TFVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLTTGRTGYIPSNYVAPS 57  chicken
1QWE_A      9 TFVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLTTGQTGYIPSNYVAPS 64  Avian sarcoma virus
1PRL_C      9 TFVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLTTGQTGYIPSNYVAPS 64  chicken
P13115     84 TFVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLARSLSSGQTGYIPSNYVAPS 139 African clawed frog
CAA45924   79 AFVALYDYESRTETDLSFKKGERLQILNNTEGDWWLANSLTTGKSGYIPSNYVAPS 134 Xiphophorus xiphidium

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