Conserved Protein Domain Family
HSR1_MMR1

?
cd01857: HSR1_MMR1 
A circularly permuted subfamily of the Ras GTPases.
Human HSR1 is localized to the human MHC class I region and is highly homologous to a putative GTP-binding protein, MMR1 from mouse. These proteins represent a new subfamily of GTP-binding proteins that has only eukaryote members. This subfamily shows a circular permutation of the GTPase signature motifs so that the C-terminal strands 5, 6, and 7 (strand 6 contains the G4 box with sequence NKXD) are relocated to the N-terminus.
Statistics
?
PSSM-Id: 206750
Aligned: 24 rows
Threshold Bit Score: 177.424
Created: 6-Jan-2012
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
  next features
Feature 1:GTP/Mg2+ binding site [chemical binding site]
Evidence:
  • Comment:based on structure of B. Subtilis Ylqf Gtpase

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                                                      ## ##                          
NP_569915 164 FWRQLWRVVERSDVVVQIVDARNPLLFRSADLERYVKEvepskmNMILVNKSDLLTeeqrrhWAEYFDSEg---IRTAFY 240 fruit fly
XP_650519 156 TWRQLWRVVERSQVVLMIVDVRFGCIQFNRKVAEWIKSln--kgFGVILNKSDLVDekivleWQEYFLKQf---GVKTLY 230 Entamoeba histolyt...
EAN33919  311 FWRQLWRVIERSHLVLIILDARDPLFFRVKDLENYIKQinqhkhFILVLNKADFLTedlrtkWAHYFKSQg---VDYLFF 387 Theileria parva
AAW41150  184 VWRQFWRVTEASQILLLLLDSRCPPLHCPPSLRTHLKSlvpskeIILVLTKSDLVDskalegWKKWVRSWwg-qESVHIV 262 Cryptococcus neofo...
EAK88896  178 FWRQLWRTIERSHVVVEIIDSRDPLFFRNVDLERYINEidplkkVVLLFNKADFLTlelrkqWIQYFKDNap-nLKVYFF 256 Cryptosporidium pa...
AAM49875  163 TWRQLWRVLEFSDILLIIVDVRYATLMFPPSLYDYIINtlk-khAIVVFNKVDLVEphavvaWRQYFRDRypqlPVVLFA 241 fruit fly
XP_638273 271 VWRQLWRVSERSDVILLVTDARYPLFHFPPSLYNYINVdlk-kpMILILNKIDLVDkriidaWIQYFNTNyphlKVICFS 349 Dictyostelium disc...
XP_756716 307 VYRQLWRVCERSDLVCVLADARCPLLHLPPSLIGFLERymr-lkVIIVLTKADIVPkhivdaWKTYLKQLyprwEVVATE 385 Ustilago maydis 521
NP_005266 177 TWRQLWRVLEMSDIVLLITDIRHPVVNFPPALYEYVTGelg-laLVLVLNKVDLAPpalvvaWKHYFHQHypqlHVVLFT 255 human
EAY21839  170 VWKELWHVLERSQVAVYIIDARDPLSFFCEDFILYMNElk--lpILICINKGDLVPppirkeWARYFEELs---HNLPFK 244 Trichomonas vagina...
Feature 1     ###                                                                             
NP_569915 241 SATLVEeelkreaeecldsfpevqqlrraveeikqsldsvedalnvieqkyk---------------------------- 292 fruit fly
XP_650519 231 VKTNQAiegrtedwdlesirnekkkeggeksyvkttlqdfen-------------------------------------- 272 Entamoeba histolyt...
EAN33919  388 STLNSNsntvnsvnsvssvntcsiteypdlds------------------------------------------------ 419 Theileria parva
AAW41150  263 SVRSKGrhkpdipqqsldelisalqaaherllhspnrdkddkeldnwkppvrssvdwa---------------------- 320 Cryptococcus neofo...
EAK88896  257 SALNEInkrehlesyipedfnlknindtdvlsthqlmyklyelasevfqaskqryldqkeynseetnettissirnddtk 336 Cryptosporidium pa...
AAM49875  242 SFLPRSrkgsqrgpqahrrsmegvyniykecqryvqgevdlttweqkir------------------------------- 290 fruit fly
XP_638273 350 SFSSLTsqghtndsgdsggieldatikrklkkgrkrydlslgkknlinavlslpiqklnliskdeinnnnn--------- 420 Dictyostelium disc...
XP_756716 386 SYAKLErmegqgsrtrfapylsphsrkdlfvalrkahtdlitppkvvqedankskewtppca------------------ 447 Ustilago maydis 521
NP_005266 256 SFPRDPrtpqdpssvlkksrrrgrgwtralgpeqllraceaitvgkvdlsswreki------------------------ 311 human
EAY21839  245 FEFVSAkapgddlitprqlil----------------------------------------------------------- 265 Trichomonas vagina...
Feature 1                                                                                     
NP_569915 293 -----------------------------------tipetqndelprlpgdknsprllsrlelieflrniytgprhteqh 337 fruit fly
XP_650519 273 ----------------------------------------------fvmelkppkeikeeekpieqeeddskkikpkekk 306 Entamoeba histolyt...
EAN33919  420 -------------------------------------------------------riynvelllerikyykrvsvdveek 444 Theileria parva
AAW41150  321 ------------------------------slkdedhipdprvdtveenigpqnsvgklpsgqgdeqstpeeakapstep 370 Cryptococcus neofo...
EAK88896  337 ngqnsnssdeevdsgkkdddeeeeddfddeesdeneefkededfeenenipnsilenkskaktdseifnhvkldplnpge 416 Cryptosporidium pa...
AAM49875  291 --------------------------------------edmrsdqldildeistavegelkisssidttphehvkyhsgv 332 fruit fly
XP_638273 421 -----------------nnnnnnnnnnnnnnnnnnnnnnndhsdegsdedsdeddddedgeeekeeeeeennqnnndndk 483 Dictyostelium disc...
XP_756716 448 -------------------------tdtdwdgverrvqlhtegfesgsgveaqedtgtkderttdkdskdpkatrshlpy 502 Ustilago maydis 521
NP_005266 312 -------------------------------ardvagatwgngsgeeeeeedgpavlveqqtdsameptgptqerykdgv 360 human
EAY21839  266 ------------------------------------------------------------------kakalaagpgrdgk 279 Trichomonas vagina...
Feature 1             #######                                                               # 
NP_569915 338 vTVGMVGYPNVGKSSTINSLMTVKKVSVSaTPGKTKRFQTLFLDk-------------------------DILLCDCPGL 392 fruit fly
XP_650519 307 lVVGLIGNPNVGKSSLLNWLVGKKVTSVSsHPGRTKYLQTYNMNk-------------------------HITLADCPGM 361 Entamoeba histolyt...
EAN33919  445 yVVGFVGYPNVGKSSLINCLMESTRTCVGtQPGKTKHIQTLPLKn------------------------sDIILCDCPGT 500 Theileria parva
AAW41150  371 lTLGLIGQPNVGKSSLLNALLGEQKVRASrTPGKTKHFQTMFWGpk-----------------------kEIKIVDCPGL 427 Cryptococcus neofo...
EAK88896  417 lTIGMVGFPNVGKSSIVNALFGSQKSSISrTPGKTKHLQTLRLKpphlnd--------------keedqdFITLCDCPGL 482 Cryptosporidium pa...
AAM49875  333 lTIGCIGFPNVGKSSLINALKGRKVVSVSrTPGHTKHFQTIFLTp-------------------------LVRLCDCPGL 387 fruit fly
XP_638273 484 iIIGMVGHPNVGKSSLINGMMGKKVVSTSrTPGHTKHFQTIVFTk-------------------------NIQLLDCPGL 538 Dictyostelium disc...
XP_756716 503 lTIGLIGQPNVGKSSLLNALFGSKVVRASkTPGKTKHFQTHFLVplrssssstpvqadqpkaggeeshrgQIRLCDSPGL 582 Ustilago maydis 521
NP_005266 361 vTIGCVGFPNVGKSSLINGLVGRKVVSVSrTPGHTRYFQTYFLTp-------------------------SVKLCDCPGL 415 human
EAY21839  280 vTIGFVGFPNVGKSSCLNSAVGRVCVRSSsTPGKTKHLQTINIEe------------------------eGITLCDCPGL 335 Trichomonas vagina...
Feature 1        
NP_569915 393 VMP 395 fruit fly
XP_650519 362 MFP 364 Entamoeba histolytica HM-1:IMSS
EAN33919  501 ILL 503 Theileria parva
AAW41150  428 VCP 430 Cryptococcus neoformans var. neoformans JEC21
EAK88896  483 VMP 485 Cryptosporidium parvum
AAM49875  388 VFP 390 fruit fly
XP_638273 539 VFP 541 Dictyostelium discoideum
XP_756716 583 VFP 585 Ustilago maydis 521
NP_005266 416 IFP 418 human
EAY21839  336 VFP 338 Trichomonas vaginalis G3

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap