Conserved Protein Domain Family
GTPBP1_like

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cd04165: GTPBP1_like 
GTP binding protein 1 (GTPBP1)-like family includes GTPBP2
Mammalian GTP binding protein 1 (GTPBP1), GTPBP2, and nematode homologs AGP-1 and CGP-1 are GTPases whose specific functions remain unknown. In mouse, GTPBP1 is expressed in macrophages, in smooth muscle cells of various tissues and in some neurons of the cerebral cortex; GTPBP2 tissue distribution appears to overlap that of GTPBP1. In human leukemia and macrophage cell lines, expression of both GTPBP1 and GTPBP2 is enhanced by interferon-gamma (IFN-gamma). The chromosomal location of both genes has been identified in humans, with GTPBP1 located in chromosome 22q12-13.1 and GTPBP2 located in chromosome 6p21-12. Human glioblastoma multiforme (GBM), a highly-malignant astrocytic glioma and the most common cancer in the central nervous system, has been linked to chromosomal deletions and a translocation on chromosome 6. The GBM translocation results in a fusion of GTPBP2 and PTPRZ1, a protein involved in oligodendrocyte differentiation, recovery, and survival. This fusion product may contribute to the onset of GBM.
Statistics
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PSSM-Id: 206728
Aligned: 17 rows
Threshold Bit Score: 290.731
Created: 20-Dec-2005
Updated: 2-Oct-2020
Structure
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Aligned Rows:
  next features
Feature 1:GTP/Mg2+ binding site [chemical binding site]
Evidence:
  • Comment:Based on sequence similarity to Era GTPase

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             ######                                                                  
AAH56806  164 RVAVVGNVDAGKSTLLGVLTHGELDNGRGFARQKLFRHKHEMESGRTSSVGNDILGFDQEGQVVNKpdshggsldw---- 239 zebrafish
XP_761655 141 RIAVIGNVDAGKSTMLGVLTKGGLDDGRGKARVNLFRHKHEVESGRTSSVGMEIMGFDSNGRPVHNvvgpgqepgrkm-- 218 Ustilago maydis 521
AAF78884  134 RVAVLGNVDSGKSTLLGVLTQGELDNGRGRARLNLFRHLHEIQSGRTSSISFEILGFNSKGEVVNYsdsrtaee------ 207 human
AAF51935  217 RVAVLGGADAGKSTLLGVLTQDELDNGHGRARLNMFRHMHEIQSGRTSCISHETLGFDALGNVVNYkynemmtae----- 291 fruit fly
XP_629619 214 RVVCCGNVDAGKSTLLGVLKCGVLDDGRGKARLNVFRHRHEVESGRTSSISQEIVGFDSKGKIVNYntlhsslsp----- 288 Dictyostelium disc...
XP_812724 336 RLAMCGNVDSGKSTLTSVLTRGCRDDGRGSARAFVFKHKHEVTTGRTSSISENFLGLSSTGEVVNYtipalkrlgggggi 415 Trypanosoma cruzi ...
AAW41661  182 RVAVVGNVDAGKSTTLGVLTRGGLDDGRGKARVALFRHPHEVETGRTSSVGGEILGFSPQGESVVPsthitdssdphhpl 261 Cryptococcus neofo...
AAX79614  338 RIAMCGNVDSGKSTLTSVLTRGCRDNGRGSARAFVFKHKHEAATGRTSSVSENHLGFSEAGEVVNYvvagakhslggvsl 417 Trypanosoma brucei
AAK42573  113 NVAVMGHVNAGKSTVTGALVLGRLDDGNGGLRTAIARHLHEVLSGRTSSITLRVIGFDDSGKIVNWqlkdpldea----- 187 Sulfolobus solfata...
AAL63708  109 TVVALGNVDAGKSTLVGVLTTGRLDDGKGLARSYASRYKHEVLTGRTSAVSLRLLGFSGDKVVNHGlidpldea------ 182 Pyrobaculum aeroph...
Feature 1                                                                                     
AAH56806  240 --------------------------------tkicersskVITFIDLAGHEKYLKTTVFGMTGHLPDFCMLMVGSNAgi 287 zebrafish
XP_761655 219 ------------------------------sweevcaksskVISFIDLAGHERYLKTTVFGMTGCLPDFVMLMVGANAgl 268 Ustilago maydis 521
AAF78884  208 ----------------------------------icessskMITFIDLAGHHKYLHTTIFGLTSYCPDCALLLVSANTgi 253 human
AAF51935  292 ---------------------------------eisdrsskLVTFMDLAGHRRYMRTTVQALSGYSPHYAMLVVSAGSgc 338 fruit fly
XP_629619 289 --------------------------------seicessskIITFVDLAGHEKYLKTTLFGMTSSSPDYCMIAVGANTmg 336 Dictyostelium disc...
XP_812724 416 s--------------------------agqlaqevvaqsakVLTLYDLAGHERYLKTTVLGMTRNMPDYACIVISANNgi 469 Trypanosoma cruzi ...
AAW41661  262 sva----------------------kreklgwedickraakVVSFIDLAGHERYFKTTLYGLSGCAPDYVMLMVGGNAgl 319 Cryptococcus neofo...
AAX79614  418 geetpndggggggggdgpignkpvtinshqlgqevaaksskVLTLYDLAGHERYLKTTVLGMTRNIPDYACVVISANNgi 497 Trypanosoma brucei
AAK42573  188 ---------------------------------ettikstkIVRLIDLGGHERYLRTTLKGLLGYEVNYVMLVVGADDgl 234 Sulfolobus solfata...
AAL63708  183 ---------------------------------evykrsdkLVLLVDVGGHERYLRTALRGLFSSQPDYVMLVVAANSgv 229 Pyrobaculum aeroph...
Feature 1                            ## #                                                     
AAH56806  288 -vgMTKEHLGLALALNVPVFVVVTKIDmcp-aniLQETLKLLQRLLk--sPGCRKIPVLvqnkddvivt--------asn 355 zebrafish
XP_761655 269 -igMSKEHLGIALALSVPVVVCITKIDmtp-ahvLETTLKQLTKILk--sPGCRKSPVFindmgqvies--------alr 336 Ustilago maydis 521
AAF78884  254 -agTTREHLGLALALKVPFFIVVSKIDlca-kttVERTVRQLERVLk--qPGCHKVPMLvtseddavta-------aqqf 322 human
AAF51935  339 -ndTTEEHLAIVRALDMPFFVLVTKTDitspdatVQELCNLLTTIGcrkvPFVVTNTDEaisagsn-------------- 403 fruit fly
XP_629619 337 atgMCKEHLGIALSLHIPVYIVITKIDrap-envLAATMTDIKKILr--gPGARKLPVViknqddvvva--------arn 405 Dictyostelium disc...
XP_812724 470 -qrMTKEHIALCLALRIPFFVVITRIDstp-envRQETLKSINKLLk--iPTVRKLPYPvrriedvvls--------akn 537 Trypanosoma cruzi ...
AAW41661  320 -igMSKEHLGVALALNVPIAVCVTKIDmtp-pniLEQTVTMLTKVLk--sPGCRRVPVFvnspqeavdcarylgkpldsg 395 Cryptococcus neofo...
AAX79614  498 -qrMTKEHVALCLALKIPFFVVITRIDstp-eniRQETLASVHKLLk--vPTVRKLPYPvrrvddvvls--------akn 565 Trypanosoma brucei
AAK42573  235 -siMGKEHLALASVLKFPIFVVITKVDkyp-edrIKGIVNDIKSVLk--iPGINRLALEvededdvvns--------ila 302 Sulfolobus solfata...
AAL63708  230 -qkMTKEHLGIAVAIGIPVFVVVTRIDitp-sevFQKTVEEVVRILk--mPGVSKIPYIikdtndvvla--------aka 297 Pyrobaculum aeroph...
Feature 1                 ###                  
AAH56806  356 fssermCPIFQISNVTGENMDLLKMFLNLLSPR 388 zebrafish
XP_761655 337 leteriCPIFQISNVTGLNLDLLRSFLNVLPQA 369 Ustilago maydis 521
AAF78884  323 aqspnvTPIFTLSSVSGESLDLLKVFLNILPPL 355 human
AAF51935  404 qiseniVPIFCVSNVTGTGLNLVTKFLYVLSPG 436 fruit fly
XP_629619 406 fvsdrvVPIFTVSNVTGENLDLLRMFLNLLPAR 438 Dictyostelium discoideum AX4
XP_812724 538 lridriVPIFEVSNVTGDGIQDLIRFLNLLPLR 570 Trypanosoma cruzi strain CL Brener
AAW41661  396 stagrlCPIFMVSNVTGQNLPLLRTFLNCLPSS 428 Cryptococcus neoformans var. neoformans JEC21
AAX79614  566 lrndriTPIFEISNVSGEGLQSLVRFLNLLPMR 598 Trypanosoma brucei
AAK42573  303 iktrrvVPIFKISNVSGKGLDLLIKFLNLLPPE 335 Sulfolobus solfataricus P2
AAL63708  298 mpagrvAPVFYVSSVTGHGLDLLLRFLSLLPRR 330 Pyrobaculum aerophilum str. IM2

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