4XDO,3OPW,5E6H,4ASK,3ZPO


Conserved Protein Domain Family
JmjC

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pfam02373: JmjC (this model, PSSM-Id:202224 is obsolete and has been replaced by 396791)
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JmjC domain, hydroxylase
The JmjC domain belongs to the Cupin superfamily. JmjC-domain proteins may be protein hydroxylases that catalyze a novel histone modification. This is confirmed to be a hydroxylase: the human JmjC protein named Tyw5p unexpectedly acts in the biosynthesis of a hypermodified nucleoside, hydroxy-wybutosine, in tRNA-Phe by catalyzing hydroxylation.
Statistics
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PSSM-Id: 202224
Aligned: 32 rows
Threshold Bit Score: 87.7363
Created: 14-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4XDO_B  168 YLYFGMWKTTFAWHTEDMDLYS---INYLHFGEPKSWYAIPPEHGKRLE---RLAQGFfpsSSQGCDAF-LRHKMTLISP 240  human
4ASK_B  238 QLYMKVPGSRTPGHQENNNFCS---VNINIGPGDCEWFAVHEHYWETIS---AFCDRH----G-------VDYLTGSWWP 300  human
3ZPO_A  204 QLYMKVPGSRTPGHQENNNFCS---VNINIGPGDCEWFVVPEDYWGVLN---DFCEKN----N-------LNFLMSSWWP 266  human
O97101  150 LVYIGSNGTYTPGHIDMCGSLSqnlMVSSDQDAFAWWFIVPTEYKDEAL---KFWGDK---------GGdVYNESRFIRP 217  Dictyostelium disco...
Q9VJ97  199 FVYMGPKNSWTSYHADVFGSFS----WSTNIVGLKKWLIMPPGEELKLN-------DR------------LGNLPFSIDE 255  fruit fly
Q5R6G2  174 WFVMGPPRSGTGIHIDPLGTS----AWNALVQGHKRWCLFPTSTPRELI---KVTRDE----GGNQQDEaITWFNVIYPR 242  Sumatran orangutan
Q9VD28  179 WFVMGPARSGTGIHIDPLGTS----AWNTLIRGHKRWCLFPTQTPKELL---KVTSAM---G-GKQRDEaITWFSTIYPR 247  fruit fly
Q9WTU0  236 YCLICVKDSYTDFHIDSGGAS----AWYHVLKGEK---IFYLIRPASAN---ISLYER---W-RSASNHsEMFFADQVDR 301  house mouse
O04698 1458 KDSLSNNSCQDDVHLGTQNGS----AVWDIFRRHDVPKLTEYLKKHHREfrhIINLPV---NSVIHPIHdQILYLNEKHK 1530 pea
O13977  225 FAYLGSHLTTTGLHTDVYASHS----FSVNLCGVKCWLFIDPKDLQTIA---SLYDDQ---Q--------LPSWITKDDL 286  Schizosaccharomyces...
4XDO_B  241 SV--LKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNF 284  human
4ASK_B  301 ILddLYASNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNV 346  human
3ZPO_A  267 NLedLYEANVPVYRFIQRPGDLVWINAGTVHWVQAVGWCNNIAWNV 312  human
O97101  218 ID--LLGAPFPIYVFKQRPGDFIFVPPDSVHQVVNCGPGISTKVAW 261  Dictyostelium discoideum
Q9VJ97  256 KM--LDEHNVRYYTINQRANEAVFVPSGWFHQVWNLTDTISVNHNW 299  fruit fly
Q5R6G2  243 TQlpTWPPEFKPLEILQKPGETVFVPGGWWHVVLNLDTTIAITQNF 288  Sumatran orangutan
Q9VD28  248 TQlpSWPEQYRPIEVLQGAGETVFVPGGWWHVVLNMDDTIAITQNF 293  fruit fly
Q9WTU0  302 CYk-----------CTVKQGQTLFIPSGWIYATLTPVDCLAFAGHF 336  house mouse
O04698 1531 KQlkLEYG-VEPWTFEQHLGEAVFIPAGCPHQVRNRKSCIKVAMDF 1575 pea
O13977  287 FRgpLVNHRHLIKILFQYPGQTVFVPSGWYHQVLNIGTTLSINHNW 332  Schizosaccharomyces pombe 972h-
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