Conserved Protein Domain Family
GST_C_eEF1b_like

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cd10308: GST_C_eEF1b_like 
Glutathione S-transferase C-terminal-like, alpha helical domain of eukaryotic translation Elongation Factor 1 beta
Glutathione S-transferase (GST) C-terminal domain family, eukaryotic translation Elongation Factor 1 beta (eEF1b) subfamily; eEF1b is a component of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. eEF1b contains a GST_C-like alpha helical domain at the N-terminal region and a C-terminal guanine nucleotide exchange domain. The GST_C-like domain likely functions as a protein-protein interaction domain, similar to the function of the GST_C-like domains of EF1Bgamma and various aminoacyl-tRNA synthetases (aaRSs) from higher eukaryotes.
Statistics
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PSSM-Id: 198341
Aligned: 14 rows
Threshold Bit Score: 91.3312
Created: 1-Apr-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putativeputative
Feature 1:putative protein interface 1 [polypeptide binding site]
Evidence:
  • Comment:based on similarity to other family members
  • Comment:Protein interface 1 is a surface used by GST-fold domains to bind other GST-fold domains in this subfamily, to facilitate complex formation.
  • Comment:Protein interface 1 corresponds to the same interacting surface used in classical GST dimerization.
  • Comment:Saccharomyces cerevisiae Arc1p uses this interacting surface to bind methionyl-tRNA synthetase.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1           ### ###### ##                            #  #     ##                          
AAH39635       20 SSAFAQLPVPAFAMGFgd--------------------lkTPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSGPPPA 79   house mouse
EFZ13212       34 CGQLFTRSEHIFTMSIgd--------------------lkTDKGIENLNDYLANRSYIEGWQPTQADVAVFEALGKPPTQ 93   red fire ant
EFZ10857       25 KAAKADNTQEYREQSD------------------------INVELESLNDDLADVSYVCGWYPTSKDAELFDTLHVVLDD 80   red fire ant
EFA02605       19 KYKAAKESKEKGQNGFspfg-----------------sklTEKHFEALNEYFSSRSYVSGYSPTTADEELYQIVSNNVKS 81   red flour beetle
XP_002431615  818 MSQKITHPLHTLLHGIdasyfks-----------vnaasySKDIFAILNGFLSDKSYLQGHRPSLVDSQVLDALDGASLT 886  human body louse
EEE24779       67 TPSLRDKSKHSHLPFTlldkmvv----------pdfgnlkSDIGVGKLNEYLASRSFITGYSATQDDAIIFSKLLGAPNA 136  Toxoplasma go...
XP_002183472    4 SANGYTRNKHCLANRVtrcvseglfspqfplfcflqfdvsSDKGAAAFNGFMGSKSYIEGWSFSPADSEMFAKFESVPDA 83   Phaeodactylum...
EGG21793       29 IWNERAEKKKRNILYVylmps--------------fadltTDAGVIDLNEYLKDKTYLVGFLPSNVDQEAVKKLGKAPCA 94   Dictyostelium...
EGI67529      751 FQFKYNANDRKLNNTCidvgngk----------wyqwtlnESCVQKALNNYLADYSYLDGYTPSQLDLSVYQSLKELNID 820  Panamanian le...
XP_395202     751 DSNFDNENIQSANDIVvgdndw------------yqntlkEKCVQEALNNYLADYSYLDGYKPSQIDTKVYQAFIKLDND 818  honey bee
Feature 1                              
AAH39635       80 d------LCHALRWYNHIKSY 94   house mouse
EFZ13212       94 qs----vNYHVIRWYNHIKSY 110  red fire ant
EFZ10857       81 el---akWPHLSRWHVNMKSF 98   red fire ant
EFA02605       82 -------CPHLNRWRTHIASF 95   red flour beetle
XP_002431615  887 itdlnseFPHVTRWWRHIDSL 907  human body louse
EEE24779      137 t-----kFVDASRWYRHVSHF 152  Toxoplasma gondii GT1
XP_002183472   84 a-----kFPHSYRWYIHVAAL 99   Phaeodactylum tricornutum CCAP 1055/1
EGG21793       95 t-----kYPHANRWYNTIQAL 110  Dictyostelium fasciculatum
EGI67529      821 fa----rHLHIKRWYNHIATF 837  Panamanian leafcutter ant
XP_395202     819 ft----nYPHLHRWYKHMTSY 835  honey bee

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