Conserved Protein Domain Family
SH2_Nterm_RasGAP

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cd10353: SH2_Nterm_RasGAP 
N-terminal Src homology 2 (SH2) domain found in Ras GTPase-activating protein 1 (GAP)
RasGAP is part of the GAP1 family of GTPase-activating proteins. The protein is located in the cytoplasm and stimulates the GTPase activity of normal RAS p21, but not its oncogenic counterpart. Acting as a suppressor of RAS function, the protein enhances the weak intrinsic GTPase activity of RAS proteins resulting in RAS inactivation, thereby allowing control of cellular proliferation and differentiation. Mutations leading to changes in the binding sites of either protein are associated with basal cell carcinomas. Alternative splicing results in two isoforms. The shorter isoform which lacks the N-terminal hydrophobic region, has the same activity, and is expressed in placental tissues. In general the longer isoform contains 2 SH2 domains, a SH3 domain, a pleckstrin homology (PH) domain, and a calcium-dependent phospholipid-binding C2 domain. The C-terminus contains the catalytic domain of RasGap which catalyzes the activation of Ras by hydrolyzing GTP-bound active Ras into an inactive GDP-bound form of Ras. This model contains the N-terminal SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites.
Statistics
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PSSM-Id: 198216
Aligned: 8 rows
Threshold Bit Score: 194.281
Created: 14-Mar-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
phosphotyrosinehydrophobic
Feature 1:phosphotyrosine binding pocket [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                    #                  #                     # #         
NP_002881     161 GPEYEEEEVAIPLTAPPTNQWYHGKLDRTIAEERLRQAGKSGSYLIRESDRRPGSFVLSFLSQMNvVNHFRIIAMCGDYY 240  human
121743        161 GPEYEEEEVAIPLTAPPTNQWYHGKLDRTIAEERLRQAGKSGSYLIRESDRRPGSFVLSFLSQMNvVNHFRIIAMCGDYY 240  human
4107166        64 DGPHMLNGERPAIIAPPESEWYHGRLDRYSAESRLRGSSKLGSYLVRESDRKPGSYVLSYYGRTG-INHFRITAVCGDFY 142  fruit fly
DAA34310       49 DGDLIENDSNISLTAPPQSQWYHGRLDRYTAEQRLQAAGGLGRYLVRESDRKPGSYVLSYLGHTG-INHFRVTAVCGDYY 127  Amblyomma var...
NP_001107303   60 GPEYEEEEVEIPLSAPPTNQWYHGKLDRTIAEERLYQASRTGSYLIRESDRRPGSFVLSFLSKTNvVTHFRIIAMCGDFY 139  western clawe...
XP_001342009  107 GPEYEEEEVVFPLSAPPTNQWYHGMLDRTIAEERLRQARTPGSYLIRESDRRPGSFVLSFLSVTSvVNHFRIIAMCGDYY 186  zebrafish
ADD69943        8 GPEYEEEEVAIPLNAPPTNQWYHGKLDRTIAEERLRQAGKPGSYLIRESDRRPGSFVLSFLSKTN-VNHFRIIAMCGDYY 86   Zonotrichia a...
NP_523361      64 DGPHMLNGERPAIIAPPESEWYHGRLDRYSAESRLRGSSKLGSYLVRESDRKPGSYVLSYYGRTG-INHFRITAVCGDFY 142  fruit fly
Feature 1                                 
NP_002881     241 IGGRRFsSLSDLIGYYSHVSCLLK 264  human
121743        241 IGGRRFsSLSDLIGYYSHVSCLLK 264  human
4107166       143 IGGRQFiSLSDLVGYYTSCSDLLK 166  fruit fly
DAA34310      128 IGGRQFdSLSDLIGYYTGWSDLLR 151  Amblyomma variegatum
NP_001107303  140 IGGRRFsSLSDLIGYYSHVSCLLK 163  western clawed frog
XP_001342009  187 IGGRRFsSLSDLIGYYSYVSCLLK 210  zebrafish
ADD69943       87 IGGRRFaSLSDLIGYYSHVSCLLK 110  Zonotrichia albicollis
NP_523361     143 IGGRQFiSLSDLVGYYTSCSDLLK 166  fruit fly

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